Abstract
The analytic solution to the nonlinear Poisson–Boltzmann equation
describing the ion distributions surrounding a nucleic acid or other
cylindrical polyions as a function of polyion structural quantities and
salt concentration ([salt]) has been sought for more than 80 years to
predict the effect of these quantities on the thermodynamics of polyion
processes. Here we report an accurate asymptotic solution of the
cylindrical nonlinear Poisson–Boltzmann equation at low to moderate
concentration of a symmetrical electrolyte (≤0.1 M 1:1 salt). The
approximate solution for the potential is derived as an asymptotic
series in the small parameter ɛ−1, where ɛ ≡
κ−1/a, the ratio of the Debye length
(κ−1) to the polyion radius (a). From the
potential at the polyion surface, we obtain the coulombic contribution
to the salt–polyelectrolyte preferential interaction (Donnan)
coefficient (Γ
) per polyion charge
at any reduced axial charge density ξ.
Γ
is the sum of the previously
recognized low-salt limiting value and a salt-dependent contribution,
analytically derived here in the range of low-salt concentrations. As
an example of the application of this solution, we obtain an analytic
expression for the derivative of the midpoint temperature of a nucleic
acid conformational transition with respect to the logarithm of salt
concentration (dTm/d ln[salt])
in terms of [salt] and nucleic acid structural quantities. This
expression explains the experimental observation that this derivative
is relatively independent of salt concentration but deviates
significantly from its low-salt limiting value in the range 0.01–0.1
M.
The cylindrical nonlinear
Poisson–Boltzmann (NLPB or PB) equation is widely used for calculating
electrostatic potential around rod-like charged objects surrounded by
mobile ions both in the theory of polyelectrolyte solutions (1, 2), in
applications in plasma physics (3) and in colloid and surface sciences
(4). In particular, the surface coulombic potential (and/or its
distance dependence) of a charged polyion in an electrolyte solution is
required for calculations of such thermodynamic properties as
electrostatic free energy (5, 6), polyion-ligand binding constant (7,
8), and especially the fundamental thermodynamic quantity
Γ
, the coulombic contribution to the
preferential interaction coefficient (equivalent to the experimentally
observable Donnan coefficient). This coefficient is required for
interpretation of thermodynamic experiments on salt–polyion
interactions and on effects of salt concentration ([salt],
Cb) on polyion processes (1, 9). Numerical
calculations of NLPB solution for the model of a long periodically
charged polyion as an infinite charged cylinder characterized by only
two structural quantities, reduced charge density
ξ§ and radius
a, are known to successfully describe experimentally
measured thermodynamic properties of polyelectrolyte solutions (1).
Monte Carlo simulations confirm the accuracy of the cylindrical PB
equation in the presence of added univalent salt up to 0.1 M (10, 11).
However, despite numerous studies devoted to solving the NLPB equation
(2, 3), no sufficiently accurate analytic solution for the cylindrical
NLPB equation was known at low- to moderate-salt concentration.
Solution of cylindrical NLPB equation is more challenging at low-salt
(LS) concentration than at high [salt], where several useful accurate
approximations for the potential, electrostatic free energy and
preferential interaction coefficient are known (4, 12–14). In the
absence of added salt, the exact analytic solution of this equation
exists in the form of elementary functions (“salt-free” solution)
for the cell model (15). For an infinite space, Ramanathan (16) derived
asymptotic approximation for NLPB potential, and MacGillivray and
Winkelman (17) obtained matched asymptotic solution for a weakly
charged polyion (ξ < 1). Other solutions of the cylindrical
NLPB equation (18, 19) provide analytic expressions for the potential
but require numerical calculations for constants. Although the NLPB
potential in the presence of salt does not differ greatly from the
“salt-free” potential (16, 20), the salt–polyelectrolyte
preferential interaction coefficient
Γ
depends exponentially on the
coulombic potential at the polyion surface (21) and is very sensitive
to small errors in the latter. We therefore sought a highly accurate
analytic expression for the NLPB surface potential of a highly charged
polyion accurate at low-to-moderate [salt] and dilute polyion
concentration, expressible in elementary functions and useful in the
analytical treatment of thermodynamic properties of
polyelectrolyte–salt solutions.
Salt–nucleic acid preferential interaction coefficients, which
characterize the net thermodynamic consequences of cation accumulation
and anion exclusion in the vicinity of a nucleic acid polyion, have
been measured by dialysis (22). Differences between preferential
interaction coefficients of reactant(s) and product(s) of a nucleic
acid process are the fundamental thermodynamic determinant of the
strong dependence of the thermodynamics of that process on [salt]
(1). Experimentally well characterized examples include the
approximately linear dependences on logarithm of [salt] of the
melting temperature Tm of nucleic acid
conformational transitions (23) and of standard free energy change
ΔG
= −RT ln
Κobs (where Κobs is the binding constant)
for binding of oligocations and other charged ligands to nucleic acids
(24) (for more references, see ref. 1). Numerical calculations of
preferential interaction coefficients, Donnan coefficient, or related
quantities using the NLPB equation and Monte Carlo simulations have
been reported in refs. 9–11 and 25–28 and refs. therein. For
extremely low but excess [salt], Gross and Strauss (26) deduced from
the numerical NLPB solution and Manning (29) subsequently derived from
the counterion condensation hypothesis the limiting law (LL) analytic
expression for Γ
,
Γ
= −(4ξ)−1 at
ξ ≥ 1 and Γ
= −1/2
+ ξ/4 at ξ < 1. More recently, analytic expressions for
Γ
at high [salt] have been derived
(6, 13). For single-stranded (ss) and double-stranded (ds) nucleic
acids, significant deviations from the LL expressions were observed
even at submicromolar [salt] (26, 30), but no analytic expression for
Γ
was available at salt concentration
from 10−6 to 0.1 M.
Previous numerical and approximate analytical solutions of the cylindrical NLPB equation show that the potential at the cylinder surface, ya, is very large when the surface charge density is high (i.e., ξ ≫ 1), especially at low [salt]. Benham (31) explained this behavior by showing the existence of a singular point of the Painleve equation, to which the cylindrical NLPB equation reduces when written in terms of coion concentration. The exact solution for the Painleve equation is available in the form of a power series in the vicinity of the singular point (31). This solution contains two unknown constants; analytic determination of these constants is required for the expansion at the singular point to have more than a theoretical significance and to serve as a basis for evaluation of the electrostatic potential around the polyion.
Here we present a LS asymptotic expansion of the exact solution of the
cylindrical NLPB equation in the form of an asymptotic series in the
small parameter ɛ−1, where ɛ−1 is the
ratio of the polyion radius (a) to Debye length
(κ−1), κ2 ≡
2nbz2e2/DD0kBT,
where nb is the bulk concentration (at r
→ ∞) of either cation or anion (in SI units), and z
is the cation valency. The functional form of the zeroth order term in
this expansion is analogous to the “salt-free” potential but with
the modified Bessel function of the second kind,
Κ0(κr), replacing the logarithm of the
radial coordinate r. Two integration constants in this term
are calculated from two boundary conditions. These constants, which
depend on ɛ and ξ, determine the salt dependence of the
preferential interaction coefficient,
Γ
. We obtain an analytic expression
for Γ
as the sum of the LL (low but
excess salt) value, Γ
, and a
[salt]-dependent term. Although results of this work are obtained for
any symmetrical electrolyte, we discuss applications of the results to
1:1 salt, because neglecting ion correlation effects in the PB approach
reduces its accuracy for multivalent ions (11, 32). The PB solution for
multivalent ions may prove useful in extensions of the PB equation
(e.g., ref. 33), where the potential is described by the cylindrical
NLPB equation everywhere except in a layer near a polyion surface.
The LS asymptotic expansion allows one to calculate the position of the singular point of the PB solution. For the highly charged cylinder, (ξ ≫ 1), we show that the singular point is located in the polyion interior at a distance on the order of a/ξ from the cylinder surface.
The NLPB Potential and Its Relation to
Γ
.
The NLPB equation describing the electric potential around a uniformly charged cylindrical polyion immersed in a symmetrical (z:z) electrolyte at infinite dilution of the polyion is
![]() |
1 |
![]() |
2 |
![]() |
3 |
where y ≡ zeψ/kBT, σ* ≡ σeza/DD0kBT. Here, ψ and y are reduced and actual potentials, respectively; y′ = dy/dr; r is the radial coordinate; and σ* and σ are the reduced and actual surface charge densities of the polyion. For a cylindrical polyion, the surface charge density is σ = e/(2πab), where b is the axial charge separation (length per elementary charge). Then the reduced surface charge density, σ*, is related to the reduced axial charge density of the cylinder, ξ, as σ* = 2ξz. Setting the derivative of the potential equal to zero at infinity, Eq. 3, guarantees the electroneutrality of the entire space (3). Then y is the potential relative to infinity [y(∞) = 0].¶
The preferential interaction coefficient is calculated either as the integral of the local deficit in coion concentration over volume surrounding the polyion (11) or as the [salt] derivative of electrostatic free energy (6, 9). If the cylindrical NLPB potential is used, the integral of coion deficit can be evaluated in closed form, yielding an expression for the preferential interaction coefficient per polyion charge in terms of ξ and ɛ, and the surface potential, ya (21)
![]() |
4 |
Eq. 4 provides the most direct route to calculating
Γ
, because it requires knowledge only
of the surface potential ya.
Results
We obtain the solution of the NLPB equation in the form of a zeroth order term of an asymptotic series in the small parameter ɛ−1, y = y0 + O(f(ɛ)) [for the detailed derivation and an estimation of the remainder of the asymptotic series, O(f(ɛ)), see Appendix A, which is published as supporting information on the PNAS web site, www.pnas.org], where the symbol O(f(ɛ)) means that the remainder of the asymptotic series is on the order of f(ɛ) as f(ɛ) → 0. The zeroth order term, y0, is analogous to the “salt-free” solution but with the modified Bessel function of the second kind, Κ0(κr) = Κ0(xɛ−1), instead of the logarithm of the radial coordinate (ln r):
![]() |
5 |
where x = r/a is the reduced radial coordinate, γ = 0.5772 is the Euler–Mascheroni constant, and β and C are integration constants. In the limit ɛ−1 → 0, S(v) = sin v when ξ ≥ 1 and S(v) = sinh v when ξ < 1. For nonvanishing values of ɛ−1 > 0, corresponding conditions on ξ and ɛ−1 are presented in Table 1 in terms of ξ and the product β(ξ − 1)−1, which arises from the boundary condition at the cylinder surface. The two integration constants, β and C, are determined from electroneutrality and boundary conditions, Eqs. 23, and 24 (Appendix A, which is published as supporting information) and depend on ξ and ɛ. Eqs. 23 and 24 yield transcendental equations for constants β and C, which we obtain approximately for various ranges of ξ and β|ξ − 1|−1 specified in Table 1.
![]() |
6a |
![]() |
6b |
![]() |
![]() |
7a |
![]() |
7b |
![]() |
7c |
Here α = eγ + ln 2 − γ = 1.897. We express remainders in Eqs. 6a, 7a, and 7b in terms of β and ξ for convenience; alternatively, they may be expressed using ɛ and ξ, because β = O((ln ɛ)−1) (Eqs. 7a and 7b).
Table 1.
Functional forms of low salt approximate analytic solution of cylindrical NLPB equation at different ranges of parameters ξ and β
| ξ | >1 | >1 | 1 | <1 | <1 |
|---|---|---|---|---|---|
| β|ξ − 1|−1 | ≪1 | ≫1 | ≫1 | ≅1 | |
| S(ν) | sin ν | sin ν | sin ν | sin ν | sinh ν |
| Eq. for C | 6a | 6a | 6a | 6a | 6b |
| Eq. for β | 7a | 7b | 7b | 7b | 7c |
Eq. for
Γ
|
10 | 11 | 11 | 11 | 12 |
The value of the surface potential can be expressed from Eq. 5 with the use of the boundary condition at the surface, Eq. 21, as
![]() |
8 |
where β is given by Eqs. 7a–7c, “+”
refers to the solution with S(v) = sin v,
and “−” refers to the case S(v) = sinh
v. For a highly charged polyion in the limit of low [salt]
(ɛ−1 → 0), β → 0 and the surface potential tends
to its limiting value, y0,a,LL =
ln[4ɛ2(ξ − 1)2], which was
previously deduced from the PB LL numerical value of
Γ
and Eq. 4 as a low-salt
approximation for ya (21), and also from the
asymptotic solution (16). When ξ < 1, β → 1 − ξ as
ɛ−1 → 0, and the limiting value for the surface
potential is y0,a,LL =
ln[16ɛ2(ξ − 1)2] − 2(1 −
ξ)(ln 2ɛ + C − γ). Accuracy of Eq.
8 and comparison to previously obtained expressions for the
surface potential (16, 17) are discussed in Appendix A,
which is published as supporting information.
Thermodynamic Applications.
Calculation of the preferential interaction coefficient
Γ
by using the surface
potential.
We use y0,a, Eq. 8, as an
approximation for the surface potential, ya, in
Eq. 4 (see Appendix A, which is published in
supporting information), which yields the LS expression for
Γ
![]() |
9 |
where “−” and “+” correspond to the solutions with
S(v) = sin v and S(v) = sinh
v, respectively. Because for a highly charged polyion β
→ 0 as [salt] decreases (ɛ−1 → 0), the first term
in Eq. 9 [−(4ξ)−1] is the LS limiting
value of Γ
, and
−β2(4ξ)−1 is the salt-dependent term.
When ξ < 1, the limiting value of β is (1 − ξ), which
produces the LL value for the preferential interaction coefficient,
Γ
= −1/2 + ξ/4, and
the salt-dependent term, given below in terms of parameters ξ and ɛ
![]() |
10 |
![]() |
11 |
![]() |
12 |
In addition to conditions on ξ specified here, we list conditions on ɛ−1 for Eqs. 10–12 in Table 1.
Accuracy of the analytic expression for the preferential
interaction coefficient Γ
.
For the model of an infinite uniformly charged cylindrical polyion,
Γ
is a function of two parameters,
ξ and ɛ. Fig. 1 shows a comparison of
Γ
obtained from the LS asymptotic
expansion, Eq. 10, and the numerical NLPB solution for dsRNA
(A) and ssRNA (B) with structural parameters
listed in Table 2. Fig. 1
A
and B Inserts present the same comparison, but for
(−4ξΓ
− 1)−0.5
plotted as a function of log Cb, for which Eq.
10 predicts a linear dependence. As one can see from Fig. 1
A and B Inserts, the plots are linear for ɛ >
1. Therefore, Eq. 10 describes the salt dependence of the
preferential interaction coefficient in the entire range ɛ > 1 with
less than 7% error for both ss- and dsRNA. For both ss- and dsRNA, the
error monotonically decreases as ɛ−1 → 0 for ɛ >
2.5. For 1 < ɛ < 2.5, the error is not monotonic, which
indicates that the asymptotic result is on the margin of its
applicability (ɛ ≅ 1), but the approximation is still acceptable
for comparison with experimental data, for which the uncertainty is
typically ±10%. At a given Cb, the LS
asymptotic expression for Γ
(Eqs.
10 and 11) becomes more accurate as ξ decreases
toward unity. (At Cb = 0.01 M the error for
dsRNA (a = 10 Å and b = 1.44 Å) is
7%, whereas for the case of ξ = 1 for a polyion with structural
parameters a = 10 Å and b = 7.14 Å,
the error is 2%.) Accuracy of the analytic expressions for
ya and Γ
for
the case ξ ≤ 1 is summarized in Table 3 and Appendix
A, which are published as Supporting Information on the PNAS web
site.
Figure 1.
Comparison of Γ
from the LS
approximation, Eq. 10 (solid line), the HS approximation,
Eq. 14 (dotted line), and numerical results (dots) for dsRNA
(A) and ssRNA (B). The error bars for the
numerical values are not shown when they are within the symbols. Dashed
line represents both LL value, Γ
,
and preferential interaction coefficient calculated from the surface
potential of ref. 16. (for description of Insets, see
text.)
Table 2.
Structural parameters and
Γ
for models of ss-, ds-, and
tsRNA.
| RNA | a, Å | b, Å | ξ | Γ
|
Cb(M) δΓ
=
δΓ
|
δΓ max
(%) |
δΓ max
(%) |
|---|---|---|---|---|---|---|---|
| ss | 7.5 | 3.2 | 2.23 | Γ
= −0.112 − 4.42 (3.62 − ln
Cb)−2
|
0.2 | 7 | 4 |
| ds | 11.8 | 1.44 | 4.96 | Γ
= −0.0504 − 1.99 (1.59 − ln
Cb)−2
|
0.05 | 7 | 4 |
| ts | 13 | 1.12 | 6.38 | Γ
= − 0.0392 − 1.55 (1.27 − ln
Cb)−2
|
0.04 | 6 | 4 |
Discussion
Low [Salt] Limiting Value and Salt Dependence of
Γ
.
Eqs. 10–12 provide expressions for
Γ
as the sum of the LL value
(Γ
= −(4ξ)−1,
ξ ≥ 1, or Γ
= −1/2
+ ξ/4, ξ < 1), which depends only on the polyion reduced
axial (structural) charge density ξ, and a [salt]-dependent term.
Previously, Anderson and Record (34) deduced from Eq. 4 and
PB LL numerical results (26) that at sufficiently low salt
concentration, the preferential interaction coefficient is represented
as Γ
=
Γ
(1 + σΓ),
where σΓ is a salt-dependent correction to the LL
value, vanishing as [salt] approaches zero. Our asymptotic expansion
of PB potential rigorously proves this fact and provides an explicit
expression for σΓ as a function of ɛ and ξ. For a
highly charged polyion at very low [salt], the [salt]-dependent
term σΓ decreases as (ln ɛ)−2.
Eqs. 10–12 provide expressions for
Γ
for the conditions on ξ and β
listed in Table 1 arising from the expansion of the boundary condition
at the cylinder surface. Because the solution, Eq. 5, is an
asymptotic expansion at small ɛ−1, another condition for
its application is ɛ ≫ 1. This condition is equivalent to the
requirement that β be small for the solution with S(v) =sin v and β be close to (1 − ξ) for the
solution with S(v) = sinh v. In practice,
for a polyion with reduced charge density distinct from 1 (ξ <
0.5 or ξ > 2), the condition on β|ξ −
1|−1 is automatically satisfied if ɛ > 1, and for a
polyion with ξ ≅ 1, Eq. 11 is applicable at not very low
[salt] (see, for example, comparison of
Γ
at ξ = 0.5 and ξ =
0.9 in Table 3, which is published as supporting information). Because
nucleic acids have relatively large axial charge density (ξ >
2), Eq. 10 can be used as an accurate analytic expression
for their preferential interaction coefficients in the entire [salt]
range where ɛ > 1.
To reveal the dependence of Γ
on
salt concentration and polyion structural parameters for a highly
charged polyion, we replace ɛ in denominator in Eq. 10 by
using the identity ɛ−2 ≡
κ2a2 ≡
8CbξVu.
![]() |
13 |
Here and below, Cb is in molar units (M),
and the polyion cylindrical volume per charge is
Vu in M−1 units. Substitution of
structural parameters of ss-, ds-, and triple-stranded (ts) RNA in Eq.
10 yields expressions for
Γ
, which are given in Table 2
together with corresponding RNA structural parameters.
Range of Applicability of Low [Salt] Expression for
Γ
.
The solution derived in this paper is obtained as an asymptotic
expansion in small parameter ɛ−1, and its accuracy
increases as ɛ increases. The high-salt (HS) approximate expression
for Γ
derived by Shkel et
al. (13) is also an asymptotic expansion result valid in the
opposite limit, ɛ → 0.
![]() |
14 |
where p = ɛξ, q̃ =
. Thus
for every polyion, there is a [salt], which separates LS (ɛ > 1)
and HS (ɛ < 1) regions, and where accuracy of both approximations is
expected to decline. The value of [salt] corresponding to ɛ = 1 is
different for polyions of different radii. Both expressions have a
comparable error in the crossover range of salt concentrations, ɛ ≅
1, and both errors increase with increasing ξ. Fig. 1 shows that the
error for the HS expression increases more slowly, therefore the HS
approximation can be used at salt concentrations where ɛ is slightly
larger than 1. For the cylindrical models of ss-, ds-, and tsRNA, Table
2 presents the salt concentrations where
δΓ
=
δΓ
and maximum errors for both
approximations in regions separated by this [salt]. The two
approximations together describe Γ
with an uncertainty of <7% for ss-, ds-, and tsRNA.
Analytic Expression for ΔΓ for RNA Transitions at Low [Salt].
Preferential interaction coefficients are the fundamental determinant
of the effect of salt concentration on the thermodynamics of nucleic
acid processes. We discuss experimental studies of RNA conformational
transitions (23) as an example of application of Eq. 10 to
thermodynamic calculations, because these reactions involve a wide
range of RNA axial charge densities (ξ ≅ 2 − 6.5, b ≅
1 − 3.2 Å) and radii (a = 7.5 − 13
Å) and independently measured enthalpies of the transitions.
Extensive numerical analysis of these transitions with NLPB cylindrical
model is available for comparison (27). For the processes of step-wise
denaturation of ts- and dsRNA polymers to the ss state, tsRNA →
dsRNA + ssRNA and dsRNA → ssRNA, in the range from 0.01 to 0.1 M
[salt] (23), the derivative of the melting temperature,
Tm, with respect to the logarithm of [salt] is
determined by the ratio ΔΓ/ΔH0, where
ΔΓ is the stoichiometrically weighted difference in preferential
interaction coefficients [Δ1Γu
= (2/3)Γu,ds +
(1/3)Γu,ss − Γu,ts
for the first reaction and Δ2Γu
= Γu,ss − Γu,ds for
the second reaction], and ΔH0 is the
transition enthalpy (both expressed per mol of nucleotide monomers).
For proper comparison with experiment, one should take into account the
excluded volume contributions to ΔΓu,
ΔΓu = ΔΓ
+
ΔΓ
, where ΔΓ
=
−6.022⋅10−4CbπΔ(a2b)
and the values of a and b (in Å) are taken from
Bond et al. (27).
The salt concentration range in experiments (23) (0.01 M < Cb < 0.1 M) coincides with the crossover region ɛ ≅ 1 for the two approximations: at 0.01 M, the LS approximation Eq. 10 is more accurate, and at 0.1 M the HS approximation Eq. 14 is more accurate.
We derive expressions for ΔΓ
and
its [salt] derivative in Appendix B, which is published as
supporting information, for any polyion conformational transition in
terms of changes in reduced charge density Δξ and volume per charge
ΔVu for this process with coefficients
depending only on [salt] and average values
ξav and Vu,av for the
process.
![]() |
15 |
![]() |
16 |
where Gξ =
π2ξ
f
(1 +
2f′avξavf
),
GV =
2π2ξ
V
f
,
G′ξ =
2π2ξ
f
(1
+ 3f′avξavf
),
G′V =
6π2ξ
V
f
,
f(ξ, Vu, Cb) = 1.715 −ln Cb − ln ξ −ln Vu + 2(ξ − 1)−1,
fav = f(ξav, Vu,av,
Cb), and f′av =
(∂f/∂ξ)|ξ=ξav. Average values of
ξ and Vu are determined by their minimal and
maximal values in the reaction ξav =
(ξmin +
ξmax)/2, Vu,av =
(Vu,max + Vu,min)/2. For
the reaction tsRNA → dsRNA + ssRNA, ξmin =
2.23, ξmax = 6.38, ξav,1 =
4.3, for the reaction dsRNA → ssRNA, ξmin =
2.23, ξmax = 4.96, ξav,2 =
3.6. The largest, the smallest, and the average volumes for both
reactions are Vu,min = 0.339
M−1, Vu,max = 0.378
M−1, and Vu,av = 0.359
M−1. Eqs. 15 and 16 are more
accurate at low [salt], because neglected terms are proportional to
some negative power of fav and
fav increases with decreasing [salt]. At 0.01
M, Eq. 15 yields
Δ1Γ
= −0.0455, which
differs only by 5% from the value obtained from the original Eq.
13 (−0.0434). For the second transition, Eq. 15
yields Δ2Γ
= −0.077,
which differs only by 3% from the value obtained from Eq.
13 (−0.0749).
In Fig. 2, we show Δ1Γu and Δ2Γu calculated from the LS and the HS approximations and from numerical NLPB solution. The experimental values of ΔΓu (27) are shown in the experimental range of salt concentration, 0.01–0.1 M, with the error of 15%. These error estimates assume average errors of 10% in ΔH0 (23) and in dTm/d log Cb.
Figure 2.
Difference in preferential interaction coefficients; comparison of the LS approximation (solid line), the HS approximation (dotted line), and numerical results (dots) for two RNA transitions: ts → ds + ss (lower curves) and ds → ss (upper curves). The errors of numerical values of ΔΓu are less than 2%.
For Δ1Γ
, the error of
the LS approximation is less that 11% below Cb
= 0.03 M, and the error of the HS approximation is less that 11%
above Cb = 0.03 M. For
Δ2Γ
, the error of the
LS approximation is less that 12% at Cb <
0.02 M. Above Cb = 0.02 M the HS
expression, Eq. 14 is a better approximation for
Δ2Γ
, accurate within
13%.
Deviation of ΔΓ
from
ΔΓ
.
Eq. 15 allows one to estimate the relative deviation of
ΔΓ
from its LL value. At low
[salt], the leading term in
ΔΓ
−
ΔΓ
is
π2ξ
f
Δξ
(because fav is large). This term predicts an
increase in magnitude of ΔΓ
− ΔΓ
(Δξ < 0) with
increasing salt concentration.
For the transitions with ξav ≥ 3.6, the
deviation (ΔΓ
−
ΔΓ
)/ΔΓ
is less than 10% when fav > 17.5, i.e.,
at [salt] lower than 3⋅10−7 M. For both transitions
considered above, Eq. 15 predicts that
(ΔΓ
−
ΔΓ
)/ΔΓ
exceeds 25% when fav < 9, i.e., at
[salt] higher than 0.001 M. Thus, in range of [salt] used in
experimental measurements in ref. 23, the deviation of ΔΓ from the
LL value is significant for both transitions and cannot be neglected in
comparing with experiments.
Eq. 16 predicts that the derivative of
ΔΓ
becomes zero at the salt
concentration determined by equation fav =
3ξav(Δξ)−1ΔVuV
− 3f′avξav. For reactions for
which the first term can be neglected (ΔVu ≅
0), the relationship for corresponding [salt] is ln
Cb = −0.26 −lnξav + 2(ξav −
1)−1 − 6ξav(ξav −
1)−2. Because the difference in
ξav for different transitions is not large,
the salt concentration where this occurs varies between 0.01 and 0.05 M
(for ξav from 3.2 to 6.5). This [salt] is in
the experimental range for both transitions analyzed here. The broad
maximum of ΔΓ
at this [salt]
explains the experimentally observed linearity of
Tm as a function of ln
Cb.
Singular Points of the Solution.
The solution of the cylindrical NLPB equation has one or two singular points. The point x = 0 (r = 0) is always a singular point of the solution, because the term 2Κ0(xɛ−1) becomes infinite. For ξ ≥ 1, the position of the second singular point is determined by the relationship Κ0(xɛ−1) = Κ0(ɛ−1) + (ξ − 1)−1. At ɛ−1 → 0, this equation yields r = ae−1/(ξ−1) + O(ɛ−1ln ɛ). This point lies between the point r = 0 and the cylinder surface r = a and approaches the surface as ξ increases. As ξ → 1, this singular point approaches the coordinate origin (r = 0), and at ξ = 1 and ɛ−1 → 0, the two singular points coincide. Thus, at ɛ−1 = 0, ξ = 1 is a bifurcation point for the cylindrical NLPB equation [similar to the cell model solution (35)], which results in different functional forms of the (approximate) solution Eq. 5.
Benham (31) presented the expansion of the exact solution of the NLPB equation for coion concentration at the singular point, which for the potential is rewritten as
![]() |
17 |
where, as above, x = r/a.
Series 17 satisfies the NLPB equation exactly, which can be verified by direct substitution of Eq. 17 into the NLPB equation. All coefficients An are uniquely expressed through two constants, x0 and A2, by induction (31). Constant x0 determines the location of the singular point. These two constants have to be determined from two boundary conditions. Because the expansion given by Eq. 17 is not valid at infinity, the boundary condition at infinity cannot be applied directly to Eq. 17.
The LS asymptotic solution of the NLPB equation, Eq. 5, provides approximate expressions for A2 and x0 when y0 is expanded at small (x − x0) and compared with series 17. In the leading order with respect to ɛ−1, these expressions are:
![]() |
18 |
![]() |
19 |
If ξ ≫ 1, then the singular point is located at the distance on the order of aξ−1 from the cylinder surface and the order of magnitude of every term in the expansion Eq. 17 differs by a factor of ξ−1 from the previous one. Although the expansion Eq. 17 does not converge sufficiently rapidly for calculation of y, it provides a clear illustration of the behavior of the solution near the singular point. When r approaches the singular point, the potential increases as the logarithm of the distance to the singular point. Because at high polyion charge density (ξ ≫ 1) the singular point is close to the cylinder surface, the potential at the polyion surface is very large.
Other Solutions for the Surface Potential and
Γ
at Low- to Moderate-Salt
Concentration.
For a long time, the LL value (value at very low [salt]) of
Γ
[Γ
= −(4ξ)−1, ξ
≥ 1 and Γ
= −1/2 +
ξ/4, ξ < 1] obtained from numerical NLPB analysis (26) and
independently from the counterion condensation hypothesis has been the
only existing analytic expression for
Γ
at low [salt]. The attempt to
introduce a deviation from the LL value of
Γ
due to exclusion of coions from the
volume of the condensed layer by Manning (36) was found less
satisfactory in explaining experimental data than numerical NLPB
calculations (27). Several approximate NLPB analytic solutions for the
potential at low salt concentrations are known, but they are
unsatisfactory for the calculation of
Γ
. Previous solutions in the presence
of the salt (18 and 19), although analytic in functional form, require
extensive numerical calculations to evaluate constants for each
[salt] and polyion structural quantity. The leading-order
approximation with respect to [salt] to the cylindrical NLPB
potential in an infinite space in the presence of salt (16) is not
sufficiently accurate for calculation of
Γ
. It yields the LL value for the
surface potential, and hence for Γ
,
but does not produce the correct [salt] dependence of
Γ
, as shown in Fig. 1 and discussed
in Appendix A, which is published as supporting information.
Another solution (17), derived by the matched asymptotic expansions
method, was obtained for a weakly charged polyion only (ξ < 1).
(See Table 3 and Appendix A, which are published as
supporting information, for comparison of this solution (17) with Eq.
8 of the present work.) The LS approximate solution of the
cylindrical NLPB equation (Eq. 5) presented here is obtained
for any value of polyion charge density ξ and exists in the entire
range of the radial coordinate (r ≥ a).
Conclusion
For a stiff polyion of either high or low charge density, Eq.
8 and the accompanying expressions for β (Eqs.
7a–7c) provide analytic expressions for the
[salt] dependence of the polyion surface potential ya,
which are sufficiently accurate to calculate the coulombic contribution
to the preferential interaction coefficient
Γ
at all reduced polyion charge
densities ξ and over a wide range of low-to-moderate [salt]. Eqs.
10–12 are, to our knowledge, the first rigorously derived
analytic expressions for the preferential interaction coefficient
Γ
at low [salt]. These expressions
show deviation of Γ
from its LL value
with increasing [salt] and depend explicitly on structural quantities
of the polyion (radius a, and charge separation
b). Different functional forms of ya and
Γ
are obtained depending on the value
of ξ relative to unity and on salt concentration via β (Table 1).
Previously, these behaviors were described analytically only under LL
conditions, where the functional forms of ya and
Γ
depend on the value of ξ relative
to unity, a result attributed to counterion condensation but derived
more generally from the NLPB equation without the hypothesis of
counterion condensation (16, 35).
Eqs. 10–12 are obtained in the LS limit (ɛ−1
→ 0), complementary to the HS limit (ɛ → 0) considered in Shkel
et al. (13). The two approximations provide explicit
analytic expressions for the preferential interaction coefficient
Γ
in the entire range of salt
concentration in the context of NLPB approach. The accuracy of both
solutions is sufficient to explain an experimentally measured
derivative of the melting temperature for RNA transitions with respect
to the logarithm of [salt].
Analytic expressions Eqs. 8, 10–12 generalize numerical data for PB surface potential and preferential interaction coefficients in the form of explicit, accurate, easy-to-use relationships and eliminate the need for numerical calculations for the cylindrical NLPB model in the future. The calculations of other thermodynamic properties of electrolyte solutions (electrostatic free energy, activity coefficient, osmotic coefficient, etc.) now can be readily performed. The solution reported here also provides a basis for the incorporation of local details at the polyion surface to examine thermodynamic consequences of ion correlations (33) or DNA structural details (9).
Supplementary Material
Acknowledgments
We thank Dr. Charles Anderson for helpful comments. This work was supported by National Institutes of Health Grant GM47022 to M.T.R.
Abbreviations
- NLPB
nonlinear Poisson-Boltzmann
- LL
limiting law
- [salt]
salt concentration
- ss
single-stranded
- ds
double-stranded
- LS
low salt
- HS
high salt
- ts
triple stranded
Footnotes
This paper was submitted directly (Track II) to the PNAS office.
ξ ≡ e2/4πDD0kBTb (ξ ≅ 7.14/b near 25°C°), where b is the average axial charge separation of a polyion, e is the proton charge, D and D0 are the dielectric constants of the bulk solution and vacuum, respectively, kB is the Boltzmann constant, and T is temperature. ξ is inversely proportional to b in water, because DT ≅ const over a wide range of temperature.
In the PB approximation, concentrations of
positively (C+), and negatively
(C−) charged ions are related to potential and
to each other through the bulk concentration Cb
(at y = 0): C± =
Cbexp(∓y), C+C−
= C
.
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