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. 2002 Mar 19;99(6):3575–3580. doi: 10.1073/pnas.052209199

Figure 5.

Figure 5

Force time series (Upper) and the corresponding force distribution histograms P(F) (Lower) obtained for 1.4-ns MD simulations of Ras/GTP (a) and Ras/GDP (b-e). The stiffness constant k of the harmonic spring attached to the COM of the side chains of residues Tyr-32 and Gly-60 varied over k = 0.2 (a and b), k = 0.1 (c), k = 4 (d), and k = 0.05 (e) (in kcal/mol⋅Å2). The thick curves represent the theoretical predictions for P(F) by using the PMF method (see text).