Table 2.
Length | 200 | 200 | 200 | 200 | 500* | 500* | 500* | 500* |
---|---|---|---|---|---|---|---|---|
%GC | 50 | 55* | 50 | 55* | 50 | 55* | 50 | 55* |
ObsCpG/ExpCpG | 0.6 | 0.6 | 0.65* | 0.65* | 0.6 | 0.6 | 0.65* | 0.65* |
5′ region | 195 | 188 | 173 | 172 | 166 | 164 | 163 | 161 |
Exon | 757 | 620 | 529 | 460 | 143 | 133 | 126 | 120 |
Alu repeats | 7,651 | 871 | 1,026 | 138 | 506 | 168 | 310 | 122 |
Unknown | 5,459 | 7,804 | 7,955 | 6,511 | 669 | 711 | 767 | 698 |
Total | 14,062 | 9,483 | 9,683 | 7,281 | 1,484 | 1,176 | 1,366 | 1,101 |
The effect of modifying the criteria on CpG island distribution is shown. Each modified parameter is indicated by an asterisk. Categorization was as described in Table 1. The existing criteria and modified criteria columns of the table are boldfaced.