Table 1.
Statistics of Interest
Statistic | Definition | Reference |
R criterion | Sum of no. of repeats of each parental allele among affected siblings; equivalent to Sobel and Lange's (1996) statistic A and recessive LOD-score statistics with q=.1 and q=.01, computed with penetrance vector (.00, .00, .50) at θ=0 | Green and Woodrow (1977) |
N criterion | Maximum no. of alleles, among affected siblings, from father, + maximum from mother; equivalent to the parental allele–difference method (Abel et al. 1998) | Green and Woodrow (1977) |
Spairs | Sum of pairwise IBD sharing, over all affected pairs in pedigree, measured as the no. of pairs sharing two IBD + 1/2the no. of pairs sharing one IBD; equivalent to Sobel and Lange's (1996) statistic D | Whittemore and Halpern (1994) |
Sobel and Lange's statistic C (S+L C) | Entropy of alleles among affecteds | Sobel and Lange (1996) |
Robust dominant statistic (Srobdom) | Sum, over founder alleles, of 7cl(i)-1, where cl(i) is the no. of affected siblings in the family who have at least one copy of allele i | McPeek (1999) |
Sall | Sum of the nos. of nontrivial permutations of all possible sets consisting of one allele from each affected individual | Whittemore and Halpern (1994) |
Sobel and Lange's statistic B (S+L B) | Maximum no. of alleles, among affecteds, that are attributable to any one descent tree | Sobel and Lange (1996) |
No. of distinct genotypes (S-#geno) | Counts −1 for each distinct genotype among affected siblings | McPeek (1999) |
Feingold and Siegmund's version of Spairs (F+S) | Sum of pairwise IBD sharing, over all affected pairs in pedigree, measured as the no. of pairs sharing two IBD + 1/4times the no. of pairs sharing one IBD | Feingold and Siegmund (1997) |
Dominant LOD score with q=.1 [ldom(.1)] and q=.01 [ldom(.01)] | LOD score computed with penetrance vector (.00, .50, .50) at θ=0 | Ott (1999) |