Table 1.
Position |
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Marker (Location) | Villard et al. (1996) | Present Study | Primer Sequencesa(5′→3′) | TA(°C) | MgCl2(mM) | RFLP Enzyme | T(°C) |
ACE1 (5′ UTR) | T−5491C | T−5529C | ACE1F:b TACAACCATCACTACTAATGTCACE1R:b TATAATATATGTGACATGGCCTG | 55 | 2 | BstNI | 60 |
ACE2 (5′ UTR) | A−5466C | A−5499C | ACE2F:b GCCATGTCACATATATTATAGGAACE2R:b CGTCTTTGGAAACTTGTCTGC | 50 | 2.5 | EcoRV | 37 |
ACE3 (5′ UTR) | T−3892C | T−3925C | ACE3F:b ATAGTGTATATAGGGCTTGGTACACE3R:b AGAAGATATTTGCAAAGTATGTACTG | 55 | 2 | PstI | 37 |
ACE4 (5′ UTR) | A−240T | A−262T | ACE4F: TGTCACTCCGGAGGCGGGAGGCTACE4R:b GAGAAAGGGCCTCCTCTCTCT | 55 | 1 | XbaI | 37 |
ACE5 (5′ UTR) | C−93T | C−115T | ACE5F2: ACCATGGCCTGGTGAAGAAGCACE5R:b CGGCTCTGCCCCTTCTCCTGCGC | TDc | 2.5 | HinfI | 37 |
ACEs2.1 (intron 7) | C5144T | ACEs1F: GGGCGGGAAGTGGTGTGCACEs1AR: CTGAAAGCAAGGAAGGAGGAG | 62 | 2 | PstI | 37 | |
ACEs1.1 (Intron 7) | G5170A | ACEs1CF: GCAGTGAGCTGAGATTGTGCCACEs1AR: CTGAAAGCAAGGAATGAGGAG | 62 | 2 | PstI | 37 | |
ACE6 (exon 8) | C1237T | C5467T | ACE6F:b AGTGCACACGGGTCACGATGACE6R-1: CACCAAGTAGCCAAAGGGCAG | 62 | 1.5 | BsmBI | 55 |
ACENEW 6 (intron 8) | A5967G | ACENEW6F: CAGGGTTCGGGATCCTCCTAGAACE6R-1: CCACCAAGTAGCCAAAGGGCAG | 62 | 1.5 | BsmBI | 55 | |
ACE7 (exon 15) | A2215G | A9596G | ACE7F:b CACACCCTGAAGTACGGCACACE7R: TCCTCCAGCTCCTGGGCAG | 60 | 1 | HaeII | 37 |
ACE I/D (intron 16) | ACEIDF: CTGGAGACCACTCCCATCCTTTCTACEIDR: GATGTGGCCATCACATTCGTCAGAT | 62 | 3 | ||||
ACE8 (exon 17) | A2350G | A11860G | ACE8F:b CTGACGAATGTGATGGCCGCACE8R:b TTGATGAGTTCCACGTATTTCG | 58 | 2 | BstUI | 60 |
ACE9 (3′ UTR) | 4656 (TC)2/3 | 21288 (CT)2/3 | ACE9FB: GACTCTGGGAAGCAGACATACE9RA: AGCTAATCCCTGTGCAGGT | (See text) | (See text) | (See text) | (See text) |
Underlined nucleotides represent the deliberate primer mismatches, designed to introduce artificial restriction sites.
Described by Keavney et al. (1998).
Touchdown PCR.