Table A.2.
Full Enriched KEGG Pathways
| pathway | pval | padj | log2err | ES | NES | size | description | |
|---|---|---|---|---|---|---|---|---|
|
| ||||||||
| KEGG_RIBOSOME | 1.2E-25 | 1.88E-23 | 1.311015 | −0.83313 | −2.80524 | 83 | Ribosome | CP:KEGG |
| KEGG_OXIDATIVE_PHOSPHORYLATION | 4.94E-24 | 6.5E-22 | 1.270913 | −0.76305 | −2.69995 | 115 | Oxidative phosphorylation | CP:KEGG |
| KEGG_PARKINSONS_DISEASE | 9.83E-22 | 9.63E-20 | 1.203975 | −0.75202 | −2.65409 | 114 | Parkinson’s disease | CP:KEGG |
| KEGG_HUNTINGTONS_DISEASE | 2.36E-19 | 2.07E-17 | 1.13309 | −0.67303 | −2.48003 | 160 | Huntington’s disease | CP:KEGG |
| KEGG_ALZHEIMERS_DISEASE | 1.07E-14 | 6.43E-13 | 0.986546 | −0.65434 | −2.3858 | 142 | Alzheimer’s disease | CP:KEGG |
| KEGG_SPLICEOSOME | 5.46E-12 | 2.17E-10 | 0.887075 | −0.63868 | −2.27513 | 122 | Spliceosome | CP:KEGG |
| KEGG_PROTEASOME | 1.21E-08 | 2.58E-07 | 0.74774 | −0.76307 | −2.23254 | 38 | Proteasome | CP:KEGG |
| KEGG_RNA_POLYMERASE | 2.38E-06 | 2.85E-05 | 0.627257 | −0.75201 | −2.08981 | 29 | RNA polymerase | CP:KEGG |
| KEGG_PYRIMIDINE_METABOLISM | 1.84E-07 | 2.92E-06 | 0.690132 | −0.60819 | −2.05718 | 87 | Pyrimidine metabolism | CP:KEGG |
| KEGG_CARDIAC_MUSCLE_CONTRACTION | 8.76E-05 | 0.000684 | 0.538434 | −0.61517 | −1.91487 | 50 | Cardiac muscle contraction | CP:KEGG |
| KEGG_VIBRIO_CHOLERAE_INFECTION | 3.73E-05 | 0.000321 | 0.557332 | −0.62928 | −1.90526 | 45 | Vibrio cholerae infection | CP:KEGG |
| KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY | 0.000619 | 0.003703 | 0.477271 | −0.67518 | −1.84442 | 26 | Cytosolic DNA-sensing pathway | CP:KEGG |
| KEGG_RNA_DEGRADATION | 0.000475 | 0.002936 | 0.498493 | −0.56999 | −1.78595 | 53 | RNA degradation | CP:KEGG |
| KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION | 0.000425 | 0.002674 | 0.498493 | −0.58394 | −1.77941 | 46 | Pathogenic Escherichia coli infection | CP:KEGG |
| KEGG_GLUTATHIONE_METABOLISM | 0.001526 | 0.008118 | 0.45506 | −0.61809 | −1.77186 | 34 | Glutathione metabolism | CP:KEGG |
| KEGG_PROTEIN_EXPORT | 0.001916 | 0.009836 | 0.45506 | −0.65377 | −1.74102 | 24 | Protein export | CP:KEGG |
| KEGG_PURINE_METABOLISM | 0.000182 | 0.001283 | 0.518848 | −0.4715 | −1.69168 | 128 | Purine metabolism | CP:KEGG |
| KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM | 0.008516 | 0.033855 | 0.38073 | −0.63818 | −1.65881 | 20 | Porphyrin and chlorophyll metabolism | CP:KEGG |
| KEGG_BASE_EXCISION_REPAIR | 0.005946 | 0.024931 | 0.407018 | −0.57019 | −1.63085 | 33 | Base excision repair | CP:KEGG |
| KEGG_DNA_REPLICATION | 0.013349 | 0.048705 | 0.38073 | −0.55602 | −1.59395 | 34 | DNA replication | CP:KEGG |
| KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM | 0.008921 | 0.035165 | 0.38073 | −0.53572 | −1.58537 | 40 | Amino sugar and nucleotide sugar metabolism | CP:KEGG |
| KEGG_NUCLEOTIDE_EXCISION_REPAIR | 0.007751 | 0.031228 | 0.407018 | −0.53165 | −1.57698 | 41 | Nucleotide excision repair | CP:KEGG |
| KEGG_PEROXISOME | 0.012036 | 0.045045 | 0.38073 | −0.46359 | −1.50635 | 68 | Peroxisome | CP:KEGG |
| KEGG_AXON_GUIDANCE | 0.010106 | 0.038821 | 0.38073 | 0.360163 | 1.397273 | 113 | Axon guidance | CP:KEGG |
| KEGG_DILATED_CARDIOMYOPATHY | 0.004068 | 0.018256 | 0.407018 | 0.455531 | 1.577319 | 57 | Dilated cardiomyopathy | CP:KEGG |
| KEGG_FOCAL_ADHESION | 0.000153 | 0.001118 | 0.518848 | 0.402761 | 1.628305 | 159 | Focal adhesion | CP:KEGG |
| KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM | 0.003516 | 0.016248 | 0.431708 | 0.464431 | 1.637177 | 64 | Phosphatidylinositol signaling system | CP:KEGG |
| KEGG_CELL_ADHESION_MOLECULES_CAMS | 0.001455 | 0.007804 | 0.45506 | 0.467835 | 1.676528 | 68 | Cell adhesion molecules (CAMs) | CP:KEGG |
| KEGG_ABC_TRANSPORTERS | 0.003268 | 0.015317 | 0.431708 | 0.575028 | 1.75762 | 31 | ABC transporters | CP:KEGG |
| KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM | 0.00027 | 0.001792 | 0.498493 | 0.536691 | 1.828867 | 53 | Hypertrophic cardiomyopathy (HCM) | CP:KEGG |
| KEGG_HEMATOPOIETIC_CELL_LINEAGE | 0.001389 | 0.007532 | 0.45506 | 0.628535 | 1.893618 | 28 | Hematopoietic cell lineage | CP:KEGG |
| KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC | 4.02E-05 | 0.000343 | 0.557332 | 0.564941 | 1.94953 | 56 | Arrhythmogenic right ventricular cardiomyopathy (ARVC) | CP:KEGG |
| KEGG_ECM_RECEPTOR_INTERACTION | 4.19E-08 | 7.82E-07 | 0.719513 | 0.658765 | 2.273305 | 56 | ECM-receptor interaction | CP:KEGG |