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. 2025 Jul 21;15:26431. doi: 10.1038/s41598-025-04120-2

Table 5.

Doxycycline dock results with α, β, and γ -CD.

Doxycycline dock result with α-CD Doxycycline dock result with β-CD Doxycycline dock result with γ -CD
Mode Affinity Dist from best mode Mode Affinity Dist from best mode Mode Affinity Dist from best mode
(kcal/mol) rmsd l.b. rmsd u.b. (kcal/mol) rmsd l.b. rmsd u.b. (kcal/mol) rmsd l.b. rmsd u.b.
1 − 5.9 0.000 0.000 1 − 7.3 0.000 0.000 1 − 8.1 0.000 0.000
2 − 5.9 2.712 4.572 2 − 7.3 2.607 6.736 2 − 7.7 1.985 4.430
3 − 5.8 1.803 3.978 3 − 7.2 1.742 4.077 3 − 7.6 2.452 6.967
4 − 5.8 2.893 8.117 4 − 7.0 2.749 7.121 4 − 7.4 3.598 6.898
5 − 5.8 3.251 7.913 5 − 6.7 3.140 7.226 5 − 7.3 2.829 6.853
6 − 5.7 2.945 7.876 6 − 6.7 3.146 5.818 6 − 7.2 2.915 6.696
7 − 5.6 2.931 7.466 7 − 6.6 2.390 3.261 7 − 7.2 3.801 6.880
8 − 5.6 3.780 6.452 8 − 6.6 3.148 5.808 8 − 7.1 2.806 7.188
9 − 5.4 3.161 7.438 9 − 6.4 2.059 4.461 9 − 7.1 2.791 7.466