| Ab | antibody |
| ART | antiretroviral therapy |
| AZM | azithromycin |
| BID | twice daily |
| CD4 | cluster of differentiation 4 |
| CSF | cerebrospinal fluid |
| CT | computed tomography |
| Dox | doxycycline |
| d | days |
| EIA | enzyme immunoassay |
| ERG | ETS-related gene |
| FTA ABS | fluorescent treponemal antibody absorption test |
| H&E | hematoxylin and eosin stain |
| HRA | high-resolution anoscopy |
| HIV | human immunodeficiency virus |
| IBD | inflammatory bowel disease |
| IHC | immunohistochemistry |
| IM | intramuscular |
| M | male |
| MRI | magnetic resonance imaging |
| MSM | men who have sex with men |
| NL | normal |
| NS | not stated |
| PCN G | penicillin G |
| PET FDG | positron emission tomography with fluorodeoxyglucose |
| RPR | rapid plasma reagin |
| TMP/SMX | trimethoprim/sulfamethoxazole |
| TPHA | Treponema pallidum hemagglutination assay |
| Trep EIA | treponemal enzyme immunoassay |
| TPPA | Treponema pallidum particle agglutination assay |
| VDRL | Venereal Disease Research Laboratory |
| WS stain | Warthin–Starry stain |
| Wt loss | weight loss |
| ↑ diarrhea | increased diarrhea |
| hematemesis | vomiting of blood |
| wk | week |