Table 3.
Genome annotations of phages using Pharokka
| Phage Name | Accession numbers | Host Strain Sequence type (ST) | Phage genome length (bp) | GC % | CDS | CDSs coding density | lysis | tRNAs | CDSs assigned function % | Hypothetical proteins % | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Salmonella phage vB_SEnST11_KE04 | PP856710 | S. Enteritidis ST11 | 42,863 | 50 | 79 | 95.56 | 6 | 0 | 50.63 | 49.37 | ||
| Salmonella phage vB_SEnST11_KE06 | PP856712 | S. Enteritidis ST11 | 42,863 | 50 | 79 | 95.55 | 6 | 0 | 51.90 | 48.10 | ||
| Salmonella phage vB_SEnST11_KE15 | PP856717 | S. Enteritidis ST11 | 23,215 | 50 | 35 | 95.75 | 2 | 0 | 68.57 | 31.43 | ||
| Salmonella phage vB_SEnST11_KE17 | PP856719 | S. Enteritidis ST11 | 42,179 | 50 | 75 | 94.47 | 6 | 0 | 54.67 | 45.33 | ||
| Salmonella phage vB_SEnST11_KE23 | PP856722 | S. Enteritidis ST11 | 148,527 | 44 | 283 | 93.92 | 7 | 24 | 34.63 | 65.37 | ||
| Salmonella phage vB_SEnST11_KE24 | PP856723 | S. Enteritidis ST11 | 53,795 | 46 | 88 | 95.07 | 4 | 0 | 50.00 | 50.00 | ||
| Salmonella phage vB_SEnST11_KE26 | PP856725 | S. Enteritidis ST11 | 52,838 | 45 | 87 | 94.82 | 3 | 0 | 45.98 | 54.02 | ||
| Salmonella phage vB_STmST313_KE27 | PP856726 | S.Typhimurium ST313 | 158,493 | 45 | 237 | 95.3 | 3 | 4 | 39.66 | 60.34 | ||
| Salmonella phage vB_STmST313_KE28 | PP856727 | S.Typhimurium ST313 | 157,588 | 45 | 235 | 95.18 | 3 | 6 | 37.87 | 62.13 | ||
| Salmonella phage vB_STmST313_KE30 | PP856728 | S.Typhimurium ST313 | 159,981 | 45 | 241 | 95.13 | 3 | 6 | 39.42 | 60.58 | ||