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. 2025 Jul 24;25:940. doi: 10.1186/s12879-025-11325-3

Table 3.

Genome annotations of phages using Pharokka

Phage Name Accession numbers Host Strain Sequence type (ST) Phage genome length (bp) GC % CDS CDSs coding density lysis tRNAs CDSs assigned function % Hypothetical proteins %
Salmonella phage vB_SEnST11_KE04 PP856710 S. Enteritidis ST11 42,863 50 79 95.56 6 0 50.63 49.37
Salmonella phage vB_SEnST11_KE06 PP856712 S. Enteritidis ST11 42,863 50 79 95.55 6 0 51.90 48.10
Salmonella phage vB_SEnST11_KE15 PP856717 S. Enteritidis ST11 23,215 50 35 95.75 2 0 68.57 31.43
Salmonella phage vB_SEnST11_KE17 PP856719 S. Enteritidis ST11 42,179 50 75 94.47 6 0 54.67 45.33
Salmonella phage vB_SEnST11_KE23 PP856722 S. Enteritidis ST11 148,527 44 283 93.92 7 24 34.63 65.37
Salmonella phage vB_SEnST11_KE24 PP856723 S. Enteritidis ST11 53,795 46 88 95.07 4 0 50.00 50.00
Salmonella phage vB_SEnST11_KE26 PP856725 S. Enteritidis ST11 52,838 45 87 94.82 3 0 45.98 54.02
Salmonella phage vB_STmST313_KE27 PP856726 S.Typhimurium ST313 158,493 45 237 95.3 3 4 39.66 60.34
Salmonella phage vB_STmST313_KE28 PP856727 S.Typhimurium ST313 157,588 45 235 95.18 3 6 37.87 62.13
Salmonella phage vB_STmST313_KE30 PP856728 S.Typhimurium ST313 159,981 45 241 95.13 3 6 39.42 60.58