AAE	Adversarial Autoencoder
AMR	Antimicrobial Resistance
ANN	Artificial Neural Network
ARDB	Antibiotic Resistance Genes Database
BN	Bayesian Network
CARD	Comprehensive Antibiotic Resistance Database
CPTAC	Clinical Proteomic Tumor Analysis Consortium
CRISPR-Cas9	Clustered Regularly Interspaced Short Palindromic Repeat
cryo-EM	Cryo-Electron Microscopy
CSM	Computed Structure Models
DNN	Deep Neural Network
DT	Decision Tree
DTI	Drug–Target Interaction
ECFP	Extended Connectivity Fingerprints
EHR	Electronic Health Record
EST	Expressed Sequence Tag
GAN	Generative Adversarial Network
GAT	Graph Attention Networks
GBM	Gradient Boosting Algorithm
GCN	Graph Convolutional Network
GCPNet	Generic Crystal Pattern Graph Neural Network
GNN	Graph Neural Network
GPCRs	G Protein-Coupled Receptors
GPR	Gaussian Process Regression
GRU	Gated Recurrent Unit
GVS	Generative Virtual Screening
GWAS	Genome-Wide Association Study
HTS	High-Throughput Screening
IND	Investigational New Drug
KEGG	Kyoto Encyclopedia of Genes and Genomes
k-NN	k-Nearest Neighbor
KRR	Kernel Ridge Regression
LBVS	Ligand-Based Virtual Screening
LLM	Large Language Models
LR	Logistic Regression
LSTM	Long Short-Term Memory
MGC	Molecular Graph Convolution
MIPD	Model-Informed Precision Dosing
MLP	Multilayer Perceptron
MPNN	Message Passing Neural Network
MS	Mass Spectrometry
NB	Naïve Bayes
NCIGDC	National Cancer Institute Genomic Data Commons
NGS	Next-Generation Sequencing
NMR	Nuclear Magnetic Resonance
PCA	Principal Component Analysis
PDB	Protein Data Bank
PLS-DA	Partial Least Squares Discriminant Analysis
PPI	Protein–Protein Interaction
PTM	Post Translational Modification
QED	Quantitative Estimate of Drug Likeness
QSAR/QSPR	Quantitative Structure–Activity/Property Relationship
RF	Random Forest
RGNs	Recurrent Geometric Networks
RL	Reinforcement Learning
RNN	Recurrent Neural Network
SBVS	Structure-Based Virtual Screening
SE (3)	Special Euclidean
SELFIES	Self-Referencing Embedded Strings
SILAC	Stable Isotope Labeling by Amino Acids in Cell Culture
SMILES	Simplified Molecular Input Line Entry System
SNP	Single-Nucleotide Polymorphism
SOM	Self-Organizing Map
SRA	Sequence Read Archive
SVR	Support Vector Regression
TFN	Tensor Field Network
VAE	Variational Autoencoder
VEGFR2	Vascular Endothelial Growth Factor Receptor 2