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. 2002 Aug 9;99(17):11411–11416. doi: 10.1073/pnas.172393399

Table 1.

Primer set used for RT-PCR amplification of the eight vRNAs of B/Yamanashi/166/98

Gene Forward primer Reverse primer
PB1 Bm-PB1b-1: Bm-PB1b-1200R:
[1A] TATTCGTCTCAGGGAGCAGAAGCGGAGCCTTTAAGATG TATTCGTCTCGATGCCGTTCCTTCTTCATTGAAGAATGG
PB1 Bm-PB1b-1220: Bm-PB1b-2369R:
[1B] TATTCGTCTCGGCATCTTTGTCGCCTGGGATGATGATG ATATCGTCTCGTATTAGTAGAAACACGAGCCTT
PB2 Bm-PB2b-1: Bm-PB2b-1145R:
[2A] TATTCGTCTCAGGGAGCAGAAGCGGAGCGTTTTCAAGATG TATTCGTCTCTCTCATTTTGCTCTTTTTTAATATTCCCC
PB2 Bm-PB2b-1142: Bm-PB2b-2396R
[2B] TATTCGTCTCATGAGAATGGAAAAACTACTAATAAATTCAGC ATATCGTCTCGTATTAGTAGAAACACGAGCATT
PA Bm-PAb-1: Bm-PAb-1261R:
[3A] TATTCGTCTCAGGGAGCAGAAGCGGTGCGTTTGA TATTCGTCTCCCAGGGCCCTTTTACTTGTCAGAGTGC
PA Bm-PAb-1283: Bm-PAb-2308R:
[3B] TATTCGTCTCTCCTGGATCTACCAGAAATAGGGCCAGAC ATATCGTCTCGTATTAGTAGAAACACGTGCATT
HA MDV-B 5′ BsmBI-HA: MDV-B 3′ BsmBI-HA:
TATTCGTCTCAGGGAGCAGAAGCAGAGCATTTTCTAATATC ATATCGTCTCGTATTAGTAGTAACAAGAGCATTTTTC
NP MDV-B 5′ BsmBI-NP: MDV-B 3′ BsmBI-NP:
TATTCGTCTCAGGGAGCAGAAGCACAGCATTTTCTTGTG ATATCGTCTCGTATTAGTAGAAACAACAGCATTTTTTAC
NA Bm-NAb-1: Bm-NAb-1557R:
TATTCGTCTCAGGGAGCAGAAGCAGAGCA ATATCGTCTCGTATTAGTAGTAACAAGAGCATTTT
M MDV-B 5′ BsmBI-M: MDV-B 3′ BsmBI-M:
TATTCGTCTCAGGGAGCAGAAGCACGCACTTTCTTAAAATG ATATCGTCTCGTATTAGTAGAAACAACGCACTTTTTCCAG
NS MDV-B 5′ BsmBI-NS: MDV-B 3′ BsmBI-NS:
TATTCGTCTCAGGGAGCAGAAGCAGAGGATTTGTTTAGTC ATATCGTCTCGTATTAGTAGTAACAAGAGGATTTTTAT

The sequences complementary to the influenza sequences are shown in bold. The 5′-ends have recognition sequences for the restriction endonuclease BsmBI (Bm, CGTCTCN1/N5). The design of the primers for PB1, PB2, and PA allowed the amplification of two fragments (1A, 1B, 2A, 2B, 3A, 3B).