TABLE 2.
clfB types, lineages, and repeat profiles organized by clfB lineage
| clfB type | clfB lineage | Repeat profilea |
|---|---|---|
| 2 | 1 | 10-2-21-22-13-23-23-13-24-1-25-26-27-8-7-28-14-19-8-5-7-29-8-7-28-8-18-30-18-14-4-4-6-31-8-7-28-10-32-33-12-32 |
| 12 | 1 | 10-2-21-22-13-23-23-13-24-54-28-10-36-12-18-30-18-14-4-4-69-33-12-38-22-36-18-27-8-32 |
| 4 | 2 | 10-8-7-28-6-21-1-35-5-27-8-7-28-10-36-37-33-8-5-6-7-9-10-12-38-18-33-12-39-33-12-38-22-40-13-33-8-18-6-22-32 |
| 19 | 2 | 10-8-7-28-6-21-45-1-35-5-27-8-7-28-10-36-37-33-8-5-6-33-9-10-12-38-18-33-12-6-22-32 |
| 17* | 3A | 1-2-3-4-54-6-8-7-26-1-8-7-28-10-36-37-14-38-33-13-14-8-18-73*-74*-18-13-33-13-33-75-14-8-18-14-12-39-30-27-8-32 |
| 23 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-14-8-15-6-16-6-17-34 |
| 25 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-13-14-8-14-14-12-33-8-15-6-16-6-17-34 |
| 30 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-14-13-14-8-14-14-12-14-8-15-6-16-6-17-34 |
| 9 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-14-14-12-14-8-15-6-16-6-17-34 |
| 22 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-14-4-14-14-12-14-8-15-6-16-6-17-34 |
| 24 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-14-8-14-12-14-8-15-6-16-6-17-34 |
| 3 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-14-8-14-14-12-14-8-15-6-16-6-17-34 |
| 21 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-14-8-14-14-12-14-8-15-6-17-34 |
| 28 | 3B | 1-2-3-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-6-13-14-8-14-14-12-14-8-15-6-16-6-17-34 |
| 26 | 3B | 1-2-3-4-5-6-7-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-14-8-14-14-12-14-8-15-6-16-6-17-34 |
| 27 | 3B | 1-2-3-4-5-6-7-4-5-6-4-7-8-8-4-5-6-7-9-10-11-12-12-18-6-33-13-33-8-14-14-12-14-8-15-6-16-6-17-34 |
| 18 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-18-6-6-13-14-8-14-14-13-8-14-8-15-6-16-8-5-6-17-18-13-17-19-20 |
| 34 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-18-6-6-14-8-14-14-13-8-14-8-11-6-17-18-13-17-19-20 |
| 7 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-18-6-6-14-8-14-14-13-8-14-8-15-6-16-8-5-6-17-18-13-17-19-20 |
| 13 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-18-6-6-14-8-14-14-13-8-14-8-15-6-16-8-5-6-17-18-13-70-19-20 |
| 29 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-18-6-6-14-8-15-6-77-8-5-6-17-18-13-17-19-20 |
| 8 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-6-6-13-14-8-14-14-13-8-14-8-15-6-16-8-5-6-17-17-19-20 |
| 1 | 3C | 1-2-3-4-5-6-4-7-8-8-8-5-6-7-9-10-11-12-12-6-6-13-14-8-14-14-13-8-14-8-15-6-16-8-5-6-17-18-13-17-19-20 |
| 35 | 3C | 1-2-3-4-5-6-7-9-10-11-12-12-18-6-6-13-14-8-14-14-13-8-14-8-15-6-16-8-5-6-17-18-13-17-19-20 |
| 36 | 4 | 34-2-21-34-20-78-10-40-8-30-44-8-46-40-40-79-30-22-30-26-1-19-45-46-68-31-8-27-80-30-18-29-55-30-32 |
| 5* | 5 | 41-2-42-43-44-43-44-30-1-32-45-46-36-45-47*-48*-14-49-19-50-1-36-51-52-20-30-53-54-55-30-56-6-36-19-53-52-20-30-53-54-51-36-19-32 |
| 6* | 5 | 41-2-42-43-44-43-44-30-1-32-45-46-36-45-47*-48*-14-49-19-50-1-36-51-52-20-30-53-54-55-30-56-6-36-19-53-52-20-30-53-54-6-36-19-32 |
| 10 | 5 | 41-2-42-43-46-36-14-49-45-57-30-58-30-36-53-6-30-15-19-59-30-6-52-20-30-54-6-36-22-29-52-60-19 |
| 14 | 6 | 41-2-42-44-30-29-20-30-54-30-29-20-30-61-29-20-71-61-51-54-52-53-8-53-20-50-8-44-52-53-8-53-20-50-8-19-64-1-68-32 |
| 11** | 6 | 41-2-42-44-30-29-20-30-54-30-29-20-30-61-29-62*-63*-61-51-54-52-53-8-53-20-50-8-44-52-53-8-53-20-50-8-19-64-53-65-61-50-64-66*-67*-68-32 |
| 16* | 6 | 41-72-50-68-44-52-53-8-53-20-50-50-8-19-64-53-65-45-50-64-66*-67*-68-32 |
| 33 | 7 | 53-21-45-14-21-53-31-8-7-28-10-36-18-14-38-18-38-28-59-36-18-6-13-28-10-13-8-18-30-14-14-30-18-38-30-38-6-8-18-14-17-34 |
| 15 | 7 | 53-21-45-14-21-53-31-8-7-28-10-36-18-14-38-18-7-28-59-36-18-14-13-28-10-12-18-30-14-14-4-18-38-18-38-14-4-18-6-17-34 |
| 37* | 7 | 53-21-45-14-21-53-31-8-7-28-10-36-18-14-38-18-7-28-59-36-18-14-13-28-10-12-18-30-14-14-4-18-38-18-81*-14-4-18-6-17-34 |
| 32 | 7 | 53-21-45-14-21-53-31-8-7-28-10-36-18-14-38-18-7-28-59-36-18-14-13-28-10-13-18-30-14-14-8-18-38-18-38-14-8-18-6-17-34 |
| 20 | 7 | 53-21-45-14-21-53-31-8-7-28-10-36-18-14-38-18-7-28-59-36-18-14-13-28-10-13-8-18-30-14-14-4-18-38-18-38-18-6-76-34 |
| 31 | 7 | 53-21-45-14-21-53-31-8-7-28-10-36-18-14-38-18-7-28-59-36-18-14-13-28-10-13-8-18-30-14-14-8-18-38-18-38-14-8-18-6-17-34 |
a
Repeat profiles are grouped by lineage. Double spaces group repeat profiles by the seven clfB lineages II. A combination of double and single spaces group repeat profiles by the nine clfB lineages I. clfB types that had a single slippage event were given a single asterisk, and if two slippage events occurred, then that clfB type was given two asterisks.