TABLE 3.
Nucleotide and amino acid sequence similarity between DhakaC13 and other group C rotavirus strains based on partial VP4 sequencesa
| Strain | Origin | Country | Accession no. | Identity (%) with DhakaC13
|
|
|---|---|---|---|---|---|
| Nucleotide (nt 21-682) | Amino acid (aa 1-220) | ||||
| Jajeri | Human | Nigeria | AF323981 | 98 | 98 |
| Moduganari | Human | Nigeria | AF323980 | 98 | 98 |
| 208 | Human | China | AB008670 | 97 | 96 |
| A93M | Human | Australia | AY395070 | 96 | 94 |
| A87J | Human | Australia | AY395069 | 96 | 96 |
| Belem | Human | Brazil | X79441 | 96 | 96 |
| Bristol | Human | U.K. | X79442 | 96 | 95 |
| Cowden | Porcine | U.S. | M74218 | 70 | 65 |
| Shintoku | Bovine | Japan | U26551 | 65 | 63 |
a
U.K., United Kingdom; U.S., United States; aa, amino acids.