TABLE 5.
Amino acid sequence similarity matrix of VP7 proteins of group C rotavirus strains of four different lineages derived from the VP7 phylogenetic tree
| VP7 lineage | % Similarity for lineage:
|
|||
|---|---|---|---|---|
| 1 | 2 | 3 | 4 | |
| 1 | 100 | |||
| 2 | 72 | 100 | ||
| 3 | 69-70 | 74 | 96 | |
| 4 | 70-71 | 72 | 84-87 | 96-100 |
Lineage 1, porcine HF strain; lineage 2, bovine sintoku strain; lineage 3, porcine cowden and WH strains; lineage 4, human group C rotavirus strains available in GenBank.