Table 1.
Basic physicochemical properties of AGO, DCL and RDR gene families in K. obovata and K. candel.
| Name | Gene-ID | Class | Exon |
PI | Protein |
Subcellular |
Instability |
|---|---|---|---|---|---|---|---|
| No. | Length(aa) | Localization | Index | ||||
| KoAGO1 | GWHGACBH008992 | AGO1 | 22 | 9.51 | 1094 | nucl | 52.33 |
| KoAGO4a | GWHGACBH018135 | AGO4 | 22 | 9.18 | 823 | nucl | 50.97 |
| KoAGO4b | GWHGACBH012002 | AGO4 | 22 | 8.90 | 850 | nucl | 47.32 |
| KoAGO5 | GWHGACBH015456 | AGO1 | 23 | 9.58 | 976 | chlo | 39.85 |
| KoAGO6 | GWHGACBH014001 | AGO4 | 21 | 9.24 | 902 | nucl | 40.32 |
| KoAGO7 | GWHGACBH006686 | AGO2 | 5 | 9.38 | 915 | nucl | 48.97 |
| KoAGO10a | GWHGACBH007846 | AGO1 | 21 | 9.24 | 945 | chlo | 47.25 |
| KoAGO10b | GWHGACBH012765 | AGO1 | 27 | 9.21 | 1120 | chlo | 46.97 |
| KoDCL1 | GWHGACBH013660 | DCL1 | 21 | 5.93 | 1973 | nucl | 39.73 |
| KoDCL2 | GWHGACBH008434 | DCL2 | 21 | 7.70 | 1341 | plas | 43.73 |
| KoDCL3 | GWHGACBH015050 | DCL3 | 27 | 6.84 | 1642 | nucl | 41.63 |
| KoDCL4 | GWHGACBH001467 | DCL4 | 25 | 6.09 | 1553 | nucl | 48.26 |
| KoRDR1a | GWHGACBH004476 | RDR1 | 9 | 8.22 | 1364 | plas | 39.25 |
| KoRDR1b | GWHGACBH004732 | RDR1 | 5 | 6.31 | 1007 | cyto | 41.91 |
| KoRDR2 | GWHGACBH000368 | RDR2 | 5 | 6.48 | 1115 | cyto | 40.46 |
| KoRDR5 | GWHGACBH014890 | RDR3 | 20 | 6.17 | 1029 | nucl | 46.83 |
| KoRDR6 | GWHGACBH004103 | RDR6 | 3 | 7.81 | 1197 | nucl | 34.57 |
| KcAGO1 | Kcandel.15559.1|m.4512 | AGO1 | 21 | 9.51 | 1063 | nucl | 51.66 |
| KcAGO2 | Kcandel.15297.1|m.4428 | AGO2 | 2 | 9.20 | 1026 | cyto | 34.32 |
| KcAGO4 | Kcandel.12388.1|m.3390 | AGO4 | 23 | 914 | 912 | nucl | 49.38 |
| KcAGO5 | Kcandel.10694.1|m.4929 | AGO1 | 21 | 9.52 | 1043 | nucl | 41.24 |
| KcAGO10a | Kcandel.1059.1|m.4569 | AGO1 | 21 | 9.18 | 991 | chlo | 47.54 |
| KcAGO10b | Kcandel.4088.2|m.3245 | AGO1 | 21 | 9.17 | 991 | chlo | 49.73 |
| KcDCL1 | Kcandel.6035.1|m.589 | DCL1 | 19 | 5.91 | 1973 | chlo | 39.99 |
| KcDCL2 | Kcandel.15116.2|m.2102 | DCL2 | 21 | 7.75 | 1441 | plas | 45.14 |
| KcDCL4 | Kcandel.3060.1|m.1214 | DCL4 | 24 | 5.94 | 1633 | nucl | 49.48 |
| KcRDR1a | Kcandel.11960.1|m.2103 | RDR1 | 4 | 7.32 | 1124 | chlo | 37.44 |
| KcRDR1b | Kcandel.155.1|m.3265 | RDR1 | 4 | 6.22 | 1125 | nucl | 41.03 |
| KcRDR2 | Kcandel.2148.1|m.3995 | RDR2 | 3 | 6.66 | 1142 | chlo | 40.01 |
| KcRDR6 | Kcandel.13659.1|m.2531 | RDR6 | 2 | 7.94 | 1197 | cyto | 34.41 |