Table 2.
Sequencing metrics for transcriptomic analysis
| Sample name | Number of raw read (million pairs) | Number of clean read (million pairs) | Mapping rate, % | Sequencing depth, x |
|---|---|---|---|---|
| c_Hu4x | 59.06 | 39.32 | 75.69 | 62 |
| c_Hu8x | 52.59 | 40.18 | 74.64 | 55 |
| c_Ro4x | 60.61 | 47.03 | 74.64 | 64 |
| c_Ro8x | 56.02 | 35.00 | 75.49 | 59 |
| c_Ru4x | 40.85 | 26.61 | 74.98 | 43 |
| c_Ru8x | 56.38 | 43.83 | 74.10 | 59 |
| 2_Hu4x | 14.79 | 9.39 | 72.63 | 16 |
| 2_Hu8x | 70.85 | 54.81 | 74.80 | 74 |
| 2_Ro4x | 91.54 | 69.09 | 72.33 | 96 |
| 2_Ro8x | 40.73 | 29.45 | 68.11 | 43 |
| 2_Ru4x | 56.61 | 44.63 | 73.18 | 59 |
| 2_Ru8x | 49.78 | 37.24 | 72.88 | 52 |
| 3_Hu4x | 31.88 | 20.52 | 73.18 | 33 |
| 3_Hu8x | 16.63 | 11.01 | 74.10 | 17 |
| 3_Ro4x | 116.42 | 110.08 | 73.74 | 122 |
| 3_Ro8x | 56.76 | 43.28 | 73.82 | 60 |
| 3_Ru4x | 97.18 | 75.00 | 74.65 | 102 |
| 3_Ru8x | 68.34 | 52.63 | 73.01 | 72 |