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. 2001 Oct 10;69(6):1370–1377. doi: 10.1086/324342

Table 2.

Primers and PCR Conditions Used for the SMADIP1-Coding-Sequence Screening[Note]

Primer
Exon Forward Reverse AnnealingTemperature (°C) PCRProduct(bp)
2 GCGATGCCCACATTGTCG TCTCGAGCCGCGTAGTG 53 229
3 ATCTCAACAGAGTGTTTAGAG GAAGATGTGAAGATGGTAC 50 354
4 TGTGCTTGGCATGCTTAG CATGACACAGGACAAATG 50 191
5 GAGATGGACTTGGGATCC CAGAGGTCAGTGCAGTG 57a 297
6 GCTGCCATTGATTTACTG GCCAATCAAAGCAATATCG 50 348
7 TTCCTCCTGCACAAAACTG AAATGCAAATGCGAGCTCC 50 191
8:
 A ATCAAGGAAATGTAACGG GTGTGTAGCCATAAGAAC 50 346
 B CTGAACAGACAGGCTTAC TGACTCACTACCGGAAG 50 411
 C GAGGAACAAGGAGTTAC CTCAGAAAGTACAGATGAC 50 434
 D CCAACAAAGCCGGAGTT TGTTAGCCTGAGAGGAG 56b 421
 E CATCACCATCTATAGCAG CTGAACACTGGGTTAGTG 50 438
 F TGAGCCTCTGAACTTGAC GCCACCTCTTTTCTTCATAG 53 361
9 GTGAGCACAAAGAGAAGC GAAATGTACAGCAGGACG 50 284
10:
 A CTAATCACCCTGTCATC TAATGCTCTGCAAGTAAGC 53 317
 B GAAAGGGCACTTGGAAC CAGCAGTGTTTTCAAGC 50 427

Note.— For PCR amplification, the reaction mixture (25 μl) contained 100 ng leukocyte DNA, 20 pmol each primer, 0.1 μM dNTP, 0.75 μl MgCl2 0.1 M, and 1 U Taq DNA polymerase (Gibco). Thirty cycles of amplification were performed, each cycle consisting of 30 s denaturation at 96°C, 30 s annealing, and 30 s elongation. PCR products were heated for 10 min at 96°C, loaded onto a GeneGel Excel 12.5/24 kit (Amersham Pharmacia Biotech), and electrophoresed for 2.5 h at 5°C and at 15°C.

a

+ 5% Dimethyl sulfoxide.

b

+ 2.5% Dimethyl sulfoxide.