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. 2002 Mar 19;99(7):4290–4295. doi: 10.1073/pnas.062398499

Table 4.

Lowest average free energy clusters of the four organic ligands bound to TLN

Ligand Cluster Size p 〈ΔG 〈ΔEelec 〈ΔEvdw 〈ΔG*des Mol D; rmsd§
IPA 1 129 0.40 −10.71 −2.74 −12.44 4.48 IPA 8  0.6; 1.1
2 30 0.06 −10.49 −2.32 −12.81 4.64 IPA 1  0.7; 2.1
3 132 0.26 −10.31 −2.03 −12.23 3.96 IPA 5  1.0; 3.4
4 90 0.06 −10.01 −1.29 −11.07 2.36 IPA 8 13.6; 15.9
ACN 1 69 0.77 −13.10 −1.37 −14.15 2.41 ACN 2 12.8; 14.6
2 104 0.15 −11.89 −5.59 −13.23 6.92 ACN 1  3.2; 5.0
3 251 0.06 −10.96 −1.92 −12.26 3.22 ACN 1  5.4; 7.1
4 30 0.01 −10.75 −0.16 −13.26 2.67 ACN 1  0.6; 1.4
5 98 0.01 −10.19 −0.63 −11.53 1.97 ACN 6; 1 17.6; 18.8
CCN 1 241 0.63 −10.42 −7.01 −7.14 3.73 CCN 1  2.0; 4.6
2 75 0.06 −9.90 −1.60 −7.64 −0.66 CCN 1 18.4; 20.8
IPH 1 134 1.00 −28.43 −3.35 −18.05 −7.03 IPH 1  2.6; 3.0
2 30 0.00 −25.58 −1.57 −18.05 −5.97 IPH 1  0.4; 1.9
3 62 0.00 −23.33 −2.20 −8.70 −12.44 IPH 1 13.1; 16.0

Experimental molecule (10). 

Shortest distance (Å) between any ligand atom and the corresponding experimentally determined ligand atom (10). 

§

Shortest rms deviation (Å) between any ligand molecule and the corresponding experimentally determined ligand molecule (10).