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. 2005 Sep 15;102(39):13825–13830. doi: 10.1073/pnas.0506967102

Table 3. Substrate reducing activities upon FeMoco addition.

Activities
C2H4 formation under C2H2/Ar
H2 formation under Ar
NH3 formation under N2
H2 formation under N2
Protein Per mg of protein Per nmol of αβ-dimer Per mg of protein Per nmol of αβ-dimer Per mg of protein Per nmol of αβ-dimer Per mg of protein Per nmol of αβ-dimer
ΔnifB Av1* 1,623 ± 15 173 ± 17 (100) 1,723 ± 82 184 ± 9 (100) 640 ± 23 68 ± 2 (100) 357 ± 43 38 ± 2 (100)
ΔnifH Av1 0 0 (0) 0 0 (0) 0 0 (0) 0 0 (0)
ΔnifH Av1′ 148 ± 32 16 ± 3 (9) 172 ± 7 18 ± 1 (10) 85 ± 25 9 ± 3 (13) 26 ± 6 3 ± 1 (8)
ΔnifB Av1v 66 ± 4 11 ± 1 (6) 183 ± 11 29 ± 2 (16) 15 ± 1 2 ± 0.2 (3) 188 ± 23 30 ± 2 (79)

It needs to be noted that IDS-oxidized, FeMoco-reconstituted ΔnifH Av1′ or ΔnifB Av1v does not show the g = 11.8 parallel-mode EPR signal (Fig. 2C), which is typical for the IDS-oxidized P2+ state of the P-cluster. This observation indicates the presence of active P-cluster variants in ΔnifH Av1′ and ΔnifB Av1v after FeMoco reconstitution. Activities are expressed in nmol per min per mg of protein and nmol per min per nmol of complete αβ-dimer. The percentages of activities relative to those per nmol of αβ-dimer of ΔnifB Av1 are given in parentheses. The lower detection limits were 0.01, 0.02. 0.001, and 0.02 nmol per min per mg of protein for C2H4 formation under C2H2/Ar, H2 formation under Ar, NH3 formation under N2, and H2 formation under N2, respectively. ΔnifB Av1, ΔnifH Av1, ΔnifH Av1′, and ΔnifB Av1v do not show any substrate reducing activities without the addition of isolated FeMoco.

*

Specific activities of FeMoco-reconstituted ΔnifB Av1 are not appreciably different from those of WT Av1 expressed by AvDJ1141 (data not shown).

Isolation of FeVco from WT Av1v on a scale that is required for our experiments has not been reported so far. Therefore, it is not possible at this point to provide any data of substrate reducing activities of FeVco-reconstituted ΔnifB Av1v. Nonetheless, a FeMoco-containing ΔnifB Av1v “hybrid” could be formed, and its specific activities were compared with the activities of fully FeMoco-reconstituted ΔnifB Av1. In this context it should be noted that the FeMoco-containing Av1 shows considerably higher substrate reducing activities than FeVco-containing Av1v (26, 27). Therefore, the FeMoco-reconstituted ΔnifB Av1v will show higher percentages of activation if Av1v is used as a standard and may represent an almost fully activated FeMoco-Av1v hybrid. However, a conclusive assessment of the percentages of activation of ΔnifB Av1v is only feasible when a sufficient amount of isolated FeVco is available.

The FeMoco reconstitution assay contained only purified αβ2-trimeric ΔnifB Av1v and isolated FeMoco. An αβ2-trimeric subunit composition of FeMoco-reconstituted ΔnifB Av1v was confirmed by molecular weight determination of the protein on the Sephacryl S-200 HR gel filtration column (data not shown).