Table 1.

Selected genes identified by SAM that are differentially expressed in primary tumors vs. all effusions. The complete list is available in Table S2.

Genes more highly expressed in Effusions

CLDN7 : claudin 7 : Hs.278562

KRT7 : keratin 7 : Hs.23881

CRIP1 : cysteine-rich protein 1 (intestinal) : Hs.423190

L1CAM : L1 cell adhesion molecule MASA: Hs.1757

ADM : adrenomedullin : Hs.394

CRYAB : crystallin, alpha B : Hs.391270

IL18RAP : interleukin 18 receptor accessory protein : Hs.158315

KRT19 : keratin 19 : Hs.182265

Genes more highly expressed in Primary Tumors

COL6A3 : collagen, type VI, alpha 3 : Hs.80988

COL1A2 : collagen, type I, alpha 2 : Hs.179573

MYB : v-myb myeloblastosis viral oncogene homolog (avian) : Hs.1334

BGN : biglycan : Hs.821

IGFBP7 : insulin-like growth factor binding protein 7 : Hs.119206

SPARC : secreted protein, acidic, cysteine-rich (osteonectin) : Hs.111779

AEBP1 : AE binding protein 1 : Hs.118397

APOD : apolipoprotein D : Hs.75736

CDH11 : cadherin 11, type 2, OB-cadherin (osteoblast) : Hs.75929