Table 2. X-ray crystallographic data.
Q425 Crystal | EDTA | Calcium | Barium |
---|---|---|---|
Data collection | |||
Space group | P43212 | P43212 | P43212 |
Unit cell dimensions, Å | a = b = 97.7 c = 112.0 | a = b = 97.2 c = 111.0 | a = b = 97.2 c = 110.3 |
No. of molecules per ASU | 1 | 1 | 1 |
Wavelength, Å | 1.5418 | 1.5418 | 1.5418 |
Resolution, Å | 20–2.5 | 20–2.9 | 20–2.8 |
Completeness,* % | 94.4 (78.8) | 92.0 (82.8) | 97.4 (78.0) |
No. of total reflections | 70,089 | 61,311 | 50,884 |
No. of unique reflections | 18,319 | 10,984 | 12,855 |
I/σ* | 7.3 (2.9) | 17.1 (2.0) | 5.5 (2.2) |
Rsym*† | 0.098 (0.26) | 0.21 (0.83) | 0.13 (0.35) |
Refinement statistics (|F| > 0σ) | |||
Resolution, Å | 20–2.5 | 20–2.9 | 20–2.8 |
Rcryst,‡ % | 20.8 | 21.4 | 21.1 |
Rfree,‡§ % | 24.9 | 29.6 | 26.9 |
Rmsd bond length, Å | 0.0066 | 0.0077 | 0.0071 |
Rmsd bond angles, ° | 1.37 | 1.55 | 1.43 |
Average B factor, Å2 | 31.0 | 71.1 | 41.6 |
Ramachandran favored,¶ % | 95.22 | 88.07 | 90.21 |
Ramachandran allowed,¶ % | 99.52 | 97.14 | 99.05 |
Values in parentheses are for the highest resolution shell
Rsym = Σ|I–〈I〉|/Σ〈I〉, where I is the observed intensity, and 〈I〉 is the average intensity of multiple observations of symmetry related reflections
R = Σhkl||Fobs|–|Fcalc||/Σhkl|Fobs|
Rfree is calculated from 5% of the reflections excluded from refinement
Calculated from ref. 36; see also http://kinemage.biochem.duke.edu