Table 2.
Statistical information of third generation and second-generation quality control data of T. sanguinea ZHSJ.
| S: No | Feature | Value |
|---|---|---|
| Third generation quality control data | ||
| 1. | Total read number | 17752 |
| 2. | Total Bases (bp) | 3.89 Gb |
| 3. | Largest base pair read length | 61076 |
| 4. | Read length of average reads | 21935.22 |
| 5. | Coverage of raw data (read depth) | 94.2459 |
| Second-generation quality control data | ||
| 6. | The length of insertion sequence | 496 bp |
| 7. | Read length of original reads | 151 bp |
| 8. | Raw pair reads | 22611262 |
| 9. | Raw bases | 3.41 Gb |
| 10. | Raw Q20% | 0.985452 |
| 11. | Raw Q30% | 0.959331 |
| 12. | Clean pair reads | 21359246 |
| 13. | Clean bases | 3.21 Gb |
| 14. | Clean Q20% | 0.988822 |
| 15. | Clean Q30% | 0.964834 |
The sequence of 496 bp was inserted into the sequencer to obtain clean reads. Here, after the quality control the percentage of bases with Phred value greater than 20 and 30 bases to the total bases were represented, which refers that the larger the Phred value, the better the quality of the sequence.