Table 3.

Telomere and centromere positions in the assembled genome.

Chr	Contig	Length (bp)	Gap	Telomere (Te)				Centromere (Ce)
				Upstream Start	Upstream End	Downstream Start	Downstream End	Start	End
Chr01	1	31,852,513	0	251	3,343	31,848,788	31,852,328	1,505,150	1,784,594
Chr02	1	31,638,724	0	29	1,,056	31,638,090	31,638,401	4,132,572	4,235,565
Chr03	1	29,918,513	0	64	6134	29,917,458	29,918,485	27,923,600	28,634,341
Chr04	1	29,558,833	0	493	3,991	29,553,555	29,558,758	16,763,413	16,977,890
Chr05	1	29,570,087	0	38	7,538	29,569,431	29,570,087	28,554,835	29,493,014
Chr06	1	29,199,514	0	63	5,031	29,198,324	29,199,475	9,609	779,212
Chr07	1	29,179,243	0	5	3,891	29,179,155	29,179,208	28,437,506	28,968,124
Chr08	1	27,751,246	0	7	6,788	27,747,489	27,751,129	1,198,505	1,281,772
Chr09	1	27,635,561	0	3	5,138	27,632,115	27,635,202	24,779,176	24,919,240
Chr10	1	26,717,877	0	44	3,433	26,713,583	26,717,829	11,069,449	11,101,393
Chr11	1	26,575,253	0	102	4,914	26,568,413	26,575,161	23,814,253	24,022,695
Chr12	1	26,190,281	0	3	4,913	26,185,410	26,190,261	1,972,765	2,010,536
Chr13	1	25,913,521	0	2	2,370	25,908,749	25,913,302	23,680,651	23,817,342
Chr14	1	25,614,823	0	6	4,500	25,609,695	25,614,798	130,448	540,036
Chr15	1	25,420,547	0	26	3,571	25,420,129	25,420,291	80,051	483,348
Chr16	1	25,111,693	0	3	4,038	25,065,727	25,111,549	1,479,578	1,691,299
Chr17	1	23,846,329	0	304	4,318	23,841,449	23,846,329	20,554,022	20,584,804
Chr18	1	23,429,025	0	380	4,462	23,428,592	23,428,950	118,946	609,424
Chr19	1	22,557,243	0	558	3,151	22,550,858	22,557,068	1,711,822	1,903,333
Chr20	1	21,388,025	0	110	5,748	21,330,373	21,388,021	20,427,089	21,220,047
Chr21	1	21,383,011	0	29	5,745	21,378,941	21,382,968	20,010,214	20,126,177
Chr22	1	19,598,755	0	4	3,098	19,593,794	19,598,751	194,577	544,417
Chr23	1	19,288,435	0	148	3,373	19,285,242	19,288,431	17,836,318	17,972,547
Chr24	1	14,856,597	0	456	28,012	14,852,448	14,856,551	405,579	524,259