Table 2. Band frequencies, fractional areas and proposed structure assignments of the components derived from IR measurements of LytC and Cpl-1.
Spectra were recorded in 2H2O in the absence (−) or presence (+) of choline (10 mM phosphate, p2H 8.0). Values are rounded off to the nearest integer. Odd-numbered columns are values in cm−1, even-numbered columns are percentages. ↑υ and ↓υ indicate high- and low-frequency components respectively.
| LytC | Cpl-1 | |||||||
|---|---|---|---|---|---|---|---|---|
| − | + | − | + | Assignment | ||||
| 1680 | 9 | − | − | − | − | 1683 | 1 | β-Sheet (↑υ) and β-turns |
| − | − | 1675 | 13 | 1677 | 11 | 1673 | 12 | β-Sheet (↑υ) and β-turns |
| 1668 | 13 | 1664 | 13 | 1659* | 33 | 1660 | 18 | β-Turns |
| 1655 | 25 | 1650† | 37 | − | − | 1650† | 22 | α-Helix, 310 helix and long loops |
| 1640 | 32 | − | − | 1646 | 14 | − | − | Unordered structure |
| − | − | 1637 | 17 | 1637 | 24 | 1635 | 45 | β-Sheet (↓υ) |
| 1627 | 17 | 1628 | 17 | 1629 | 17 | − | − | β-Sheet (↓υ) |
| 1613‡ | 4 | 1612‡ | 3 | 1612‡ | 1 | 1614‡ | 2 | |
* Maximum position could indicate some overlap with the α-helix component.
† Maximum position could indicate some overlap with the component from unordered structures.
‡ Bands at around 1612 cm−1 in native proteins arise from amino acid side chains.