| ACN | Acetonitrile |
| AGC | Automatic gain control |
| COSMIC | Catalogue of Somatic Mutations in Cancer |
| CRC | Colorectal cancer |
| DIA | Data-independent acquisition |
| FA | Formic acid |
| FDR | False discovery rate |
| MS | Mass spectrometry |
| PCA | Principal component analysis |
| SDS | Sodium dodecyl sulfate |
| TFA | Trifluoroacetic acid |