TABLE 1.
Mismatches between genomes of enterovirus and the oligonucleotide sequences used
| Virus typea | No. of mismatches with:
|
||
|---|---|---|---|
| Pan- entero + | Pan- entero − | TaqMan probe | |
| Coxsackievirus A | 0 | 1 | 0 |
| Coxsackievirus A16 G-10 | 0 | 0 | 0 |
| Coxsackievirus A24 | 0 | 0 | 1 |
| Coxsackievirus A9 | 0 | 0 | 0 |
| Coxsackievirus B1 | 0 | 0 | 0 |
| Coxsackievirus B2 strain Ohio-1 | 0 | 0 | 0 |
| Coxsackievirus B3 | 0 | 0 | 0 |
| Coxsackievirus B4 | 0 | 1 | 0 |
| Coxsackievirus B5 | 0 | 1 | 0 |
| Coxsackievirus B6 | 0 | 1 | 0 |
| Echovirus 23 | 9 | 12 | 16 |
| Echovirus 5 | 0 | 0 | 0 |
| Echovirus 6 lytic strain | 0 | 0 | 0 |
| Echovirus 9 | 1 | 0 | 0 |
| Echovirus type 12, prototype Travis | 0 | 3 | 1 |
| Enterovirus 70 | 0 | 1 | 0 |
| Enterovirus 71 BrCr | 0 | 1 | 0 |
| Enterovirus 71 MS,7423,87 | 0 | 0 | 0 |
| Poliovirus type 2 genome strain Sabin 2 | 0 | 0 | 0 |
| Poliovirus type 3 strain 23127 | 0 | 1 | 0 |
| Poliovirus, strain Sabin 1 | 0 | 0 | 0 |
a
Viruses registered in the DNA Data Bank of Japan as a full sequence of enterovirus but excluding animal viruses.