Table 2.
Similarity distance matrix of H gene between representative CDV lineages.
| GenBank accession number | Z77672.1 (%) | DQ226087.1 (%) | DQ903854.1 (%) | EU716337.1 (%) | EU743934.1 (%) | EU716075.1 (%) | FJ392652.1 (%) | FJ461695.1 (%) | GU266280.1 (%) | JN153020.1 (%) | JF283477.1 (%) | JN812976.1 (%) | KJ437596.1(%) | KT266736.1 (%) | MF964178.1 (%) | MK617349.1 (%) | MW535267,1 (%) | CA584 (%) | PNH208_18 (%) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Z77672.1 | 0.00 | 5.32 | 8.06 | 3.25 | 10.64 | 6.47 | 2.36 | 5.15 | 2.58 | 4.28 | 4.27 | 4.44 | 5.37 | 6.41 | 5.48 | 4.50 | 5.56 | 2.08 | 2.19 |
| DQ226087.1 | 5.32 | 0.00 | 8.44 | 4.93 | 10.64 | 6.74 | 5.43 | 5.37 | 3.95 | 5.81 | 6.13 | 6.30 | 6.91 | 8.06 | 7.07 | 5.87 | 7.24 | 5.70 | 5.92 |
| DQ903854.1 | 8.06 | 8.44 | 0.00 | 8.00 | 13.32 | 9.38 | 8.33 | 8.33 | 7.13 | 8.77 | 9.23 | 8.77 | 9.21 | 10.58 | 9.65 | 8.83 | 9.92 | 8.44 | 8.55 |
| EU716337.1 | 3.25 | 4.93 | 8.00 | 0.00 | 10.20 | 6.20 | 3.62 | 5.04 | 2.31 | 4.11 | 3.34 | 4.50 | 5.10 | 6.20 | 5.26 | 4.33 | 4.44 | 3.84 | 3.84 |
| EU743934.1 | 10.64 | 10.64 | 13.32 | 10.20 | 0.00 | 5.70 | 10.75 | 10.58 | 9.38 | 11.24 | 11.83 | 11.40 | 11.90 | 12.45 | 12.23 | 11.29 | 11.79 | 10.80 | 10.91 |
| EU716075.1 | 6.47 | 6.74 | 9.38 | 6.20 | 5.70 | 0.00 | 6.74 | 6.74 | 5.15 | 7.24 | 7.37 | 7.57 | 8.00 | 8.72 | 8.28 | 7.24 | 7.95 | 6.91 | 7.07 |
| FJ392652.1 | 2.36 | 5.43 | 8.33 | 3.62 | 10.75 | 6.74 | 0.00 | 5.37 | 2.96 | 4.99 | 4.52 | 5.10 | 5.65 | 6.74 | 5.54 | 5.15 | 5.98 | 2.80 | 2.96 |
| FJ461695.1 | 5.15 | 5.37 | 8.33 | 5.04 | 10.58 | 6.74 | 5.37 | 0.00 | 4.06 | 5.81 | 6.13 | 6.09 | 6.80 | 8.17 | 7.13 | 5.98 | 6.74 | 5.43 | 5.59 |
| GU266280.1 | 2.58 | 3.95 | 7.13 | 2.31 | 9.38 | 5.15 | 2.96 | 4.06 | 0.00 | 3.18 | 3.16 | 3.40 | 4.11 | 5.26 | 4.55 | 3.45 | 4.42 | 3.13 | 3.23 |
| JN153020.1 | 4.28 | 5.81 | 8.77 | 4.11 | 11.24 | 7.24 | 4.99 | 5.81 | 3.18 | 0.00 | 4.77 | 5.43 | 5.48 | 7.02 | 6.36 | 4.99 | 6.09 | 4.77 | 4.88 |
| JF283477.1 | 4.27 | 6.13 | 9.23 | 3.34 | 11.83 | 7.37 | 4.52 | 6.13 | 3.16 | 4.77 | 0.00 | 5.02 | 5.88 | 6.44 | 5.88 | 5.70 | 5.94 | 4.71 | 4.71 |
| JN812976.1 | 4.44 | 6.30 | 8.77 | 4.50 | 11.40 | 7.57 | 5.10 | 6.09 | 3.40 | 5.43 | 5.02 | 0.00 | 6.52 | 7.29 | 4.55 | 5.76 | 6.47 | 5.21 | 5.32 |
| KJ437596.1 | 5.37 | 6.91 | 9.21 | 5.10 | 11.90 | 8.00 | 5.65 | 6.80 | 4.11 | 5.48 | 5.88 | 6.52 | 0.00 | 7.35 | 7.40 | 5.87 | 6.30 | 5.76 | 5.87 |
| KT266736.1 | 6.41 | 8.06 | 10.58 | 6.20 | 12.45 | 8.72 | 6.74 | 8.17 | 5.26 | 7.02 | 6.44 | 7.29 | 7.35 | 0.00 | 7.95 | 6.63 | 7.68 | 7.07 | 7.02 |
| MF964178.1 | 5.48 | 7.07 | 9.65 | 5.26 | 12.23 | 8.28 | 5.54 | 7.13 | 4.55 | 6.36 | 5.88 | 4.55 | 7.40 | 7.95 | 0.00 | 6.58 | 7.13 | 5.98 | 6.03 |
| MK617349.1 | 4.50 | 5.87 | 8.83 | 4.33 | 11.29 | 7.24 | 5.15 | 5.98 | 3.45 | 4.99 | 5.70 | 5.76 | 5.87 | 6.63 | 6.58 | 0.00 | 6.63 | 5.32 | 5.43 |
| MW535267.1 | 5.56 | 7.24 | 9.92 | 4.44 | 11.79 | 7.95 | 5.98 | 6.74 | 4.42 | 6.09 | 5.94 | 6.47 | 6.30 | 7.68 | 7.13 | 6.63 | 0.00 | 6.14 | 6.25 |
| CAS584 | 2.08 | 5.70 | 8.44 | 3.84 | 10.80 | 6.91 | 2.80 | 5.43 | 3.13 | 4.77 | 4.71 | 5.21 | 5.76 | 7.07 | 5.98 | 5.32 | 6.14 | 0.00 | 0.66 |
| NHP 208_18 | 2.19 | 5.92 | 8.55 | 3.84 | 10.91 | 7.07 | 2.96 | 5.59 | 3.23 | 4.88 | 4.71 | 5.32 | 5.87 | 7.02 | 6.03 | 5.43 | 6.25 | 0.66 | 0.00 |
Note: Z77672.1 (Germany,Europe-1/South America-1 lineage); DQ226087.1 (Italy,Artic lineage); DQ903854.1 (Hungary,America-1 lineage); EU716337.1 (USA,America-2 lineage); EU743934.1 (China,Asia-3 lineage); EU716075.1 (South Korea,Asia-1 lineage); FJ392652.1 (Argentina,South America-2); FJ461695.1 (South Africa,Africa-1 lineage); GU266280.1 (Denmark,Rockborn-like lineage); JN153020.1 (Germany,Europe wildlife lineage); JF283477.1 (USA,America-5 lineage); JN812976.1 (Tanzania,Africa-2 lineage); KJ437596.1 (China,Asia-4 lineage); KT266736.1 (Mexico,North America-3 lineage); MF964178.1 (India,Asia-5 lineage); MK617349.1 (Colombia,South America/North America-4 lineage); MW535267.1 (China,Asia-6 lineage); CAS584 (Ce.thous584); NHP 208_18 (Ca.penicillata20818).