Table 1. dDDH values of phylogroup C. The table presents dDDH values obtained using three Genome blast Distance Phylogeny formulas: d0 (HSP length/total genome length), d4 (sum of identities in HSPs/HSP length) and d6 (sum of identities in HSPs/total genome length). The confidence intervals (C.I.) for each formula provide an estimate of variability in similarity values.
| Identifier | Subject strain | C.I. (d0, in %) | C.I. (d4, in %) | C.I. (d6, in %) | G+C content difference (in %) |
|---|---|---|---|---|---|
| GCF 001656295.1 | M. canis | 65.8–73.4 | 44.6–49.7 | 62.8–69.4 | 1.46 |
| M. catarrhalis | 53.9–61.0 | 34.4–39.4 | 49.5–55.7 | 2.07 | |
| GCF 001656335.1 | M. canis | 68.1–75.7 | 45.0–50.1 | 64.8–71.5 | 1.39 |
| M. catarrhalis | 53.6–60.7 | 34.0–39.0 | 49.1–55.3 | 2.14 | |
| GCF 001656355.1 | M. canis | 68.1–75.7 | 44.7–49.8 | 64.7–71.3 | 1.43 |
| M. catarrhalis | 53.4–60.4 | 33.8–38.8 | 48.9–55.0 | 2.09 | |
| GCF 001656375.1 | M. canis | 68.1–75.7 | 45.0–50.2 | 64.8–71.5 | 1.4 |
| M. catarrhalis | 53.5–60.6 | 33.9–38.9 | 49.0–55.2 | 2.13 | |
| GCF 000193045.1* | M. catarrhalis | 95.0–97.9 | 90.2–93.9 | 96.4–98.4 | 0.13 |
| M. canis | 37.7–44.5 | 24.4–29.2 | 33.5–39.5 | 3.66 | |
| GCF 001656415.1* | M. catarrhalis | 81.6–88.4 | 62.4–68.1 | 81.2–87.2 | 0.13 |
| M. canis | 38.2–45.0 | 24.7–29.6 | 34.0–40.0 | 3.66 |
*Correspond to the representative strain of phylogroup A (GCF_000193045.1) and one from phylogroup B (GCF_001656415.1).