Table 2.
ISSR and RAPD primers used for PCR amplification to evaluate genetic diversity in walnut genotypes distributed in inner Anatolia region Türkiye.
| ISSR Primers Code | DNA Sequences (5’−3’) | Tm oC | Ta oC | PCR amplification |
|---|---|---|---|---|
| UBC-808 | 5′-AGAGAGAGAGAGAGAGC-3′ | 52 | 49 |
94 °C–3 min 94 °C–1 min 48–53 °C 1 min 72 °C–1 min 72 °C–10 min 35 cycles |
| UBC-810 | 5′-GAGAGAGAGAGAGAGAT-3′ | 50 | 47 | |
| UBC-811 | 5′-GAGAGAGAGAGAGAGAC-3′ | 53 | 50 | |
| UBC-826 | 5′-ACACACACACACACACC-3′ | 52 | 48 | |
| UBC-831 | 5′-CTCTCTCTCTCTCTCTT-3′ | 50 | 48 | |
| UBC-834 | 5′-AGAGAGAGAGAGAGAYT-3′ | 52 | 50 | |
| UBC-836 | 5′-AGAGAGAGAGAGAGAGYA-3′ | 52 | 50 | |
| UBC-873 | 5′-GACAGACAGACAGACA-3′ | 48 | 46 | |
| UBC-880 | 5′-GGAGAGGAGAGGAGA-3′ | 55 | 53 | |
| RAPD Primers Code | ||||
| OPA-2 | 5′-TGCCGAGCTG-3′ | 34 | 32 |
94 °C–3 min 94 °C–1 min 30–32 °C 1 min 72 °C–1 min 72 °C–10 min 35 cycles |
| OPA-5 | 5′-AGGGGTCTTG-3′ | 32 | 30 | |
| OPA-7 | 5′-GAAACGGGTG-3′ | 32 | 30 | |
| OPA-18 | 5′-AGGTGACCGT-3′ | 32 | 30 | |
| OPA-20 | 5′-GTTGCGATCC-3′ | 32 | 30 | |
Tm = melting temperature, Ta = annealing temperature.