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. 2025 Jul 24;15(16):8031–8048. doi: 10.7150/thno.115131

Table 2.

Single EV characterization methods

Method Advantages Disadvantages Detection Limit References
flow cytometry high-throughput multiparametric analysis
surface marker-specific detection using fluorescent antibodies
limited sensitivity to small EVs (<100 nm), specificity depends on antibody quality and labeling
signal overlap and background can affect accuracy
~100-150 nm 94-96
NTA size distribution of individual EVs
high-throughput
fluorescent mode allows limited marker-specific detection
low resolution for heterogeneous or small EVs
requires large sample volumes
~30-100 nm 97, 98
AFM high spatial resolution
label-free morphological analysis
high specificity for physical properties (stiffness, size, surface structure)
low throughput
technical expertise required
<10 nm 99
Raman spectroscopy/SERS label-free chemical composition high biochemical specificity low throughput sensitive to noise and sample preparation artifacts 27, 100, 101
TEM high morphological resolution
high specificity for EV structure and morphology selective molecular identification via immunogold labeling enables
labor-intensive
low throughput
<10 nm 102
Super-Resolution Microscopy allows investigation of EVs functions in vivo/in situ with molecular resolution requires labels 103, 104
SPRi real-time monitoring of EVs-ligand binding kinetics, small sample size, label free labor intensive, limited by use of capturing molecules 105, 106
Digital ELISA detection of EV surface or cargo proteins requires optimized antibody pairs <100 EVs/mL 95, 107
Nano-FTIR label-free quantitative and qualitative characterization of EV biochemical content, minimal preprocessing, small sample size technically demanding
low throughput
~50-100 nm 108
qSMLM Quantitative characterization of the size, shape and protein content requires optimized antibody pairs,
low throughput, complex sample preparation, and limited multiplexing capabilities
~10 nm 109, 110