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. 2025 Jul 25;15(16):8259–8319. doi: 10.7150/thno.116153

Table 1.

Advantages and disadvantages of common fluorescent probes.

Probes Examples Advantages Disadvantages Ref.
UCNPs NaYF4:Yb,Er; NaGdF4:Yb,Tm Large anti-Stokes shift; Narrow emission spectra; Long fluorescence lifetime; Strong stability Low quantum yield; Potential biotoxicity 364
Fluorescent proteins GFP; RFP; BFP High biocompatibility; Genetically encodable Poor stability; Shallow tissue penetration; Moderate quantum yield 365
Organic dyes Cy5; FITC; ICG High quantum yield; Ease of functionalization and bioconjugation Poor stability; Biotoxicity; Broad emission spectra 366
Quantum dots CdSe@ZnS; CdTe; InP@ZnS High quantum yield; Broad excitation spectra; Narrow tunable emission; Strong stability Heavy metal toxicity; Photoblinking 367
Metal complexes [Ru(bpy)3]2+; Ir(ppy)3 Long fluorescence lifetime; Strong stability; Tunable redox activity Heavy metal toxicity; Poor stability; Shallow tissue penetration 368
Carbon dots Nitrogen-doped carbon dots; B-doped carbon dots Low biotoxicity; Strong stability Moderate quantum yield; Broad emission spectra; Limited functionalization and bioconjugation capacity 369

GFP: green fluorescent protein; RFP: red fluorescent protein; BFP: blue fluorescent protein; Cy5: cyanine 5; FITC: fluorescein isothiocyanate; ICG: indocyanine green.