Table 4.
Genetic variant classification, co-segregation analysis, and clinical interpretation in HAE-nC1-INH patients
| Patient # | Gene | cDNA change | Protein change | ACMG classification | Family data summary | Co-segregation observation | Final interpretation |
|---|---|---|---|---|---|---|---|
| 1 | MYOF | c.5923G > A | p.Glu1975Lys | VUS (PM2) | No family tested | Not available | Variant of uncertain significance |
| 2 | MYOF | c.6001 C > G | p.Arg2001Gly | VUS (PM2) | Daughters negative; mother deceased (symptomatic) | Incomplete | Variant of uncertain significance |
| 3 | MYOF | c.3965 C > G | p.Ala1322Gly | VUS (PM2) | Mother carrier, asymptomatic | Yes | Variant of uncertain significance |
| 4 | MYOF | c.1097G > T | p.Arg366Leu | VUS (PM2) | Not tested | Not available | Variant of uncertain significance |
| 5 | HS3ST6 | c.497G > A | p.Arg166His | VUS (PM2) | Mother carrier, asymptomatic | Yes | Variant of uncertain significance |
| 6 | FXII | c.303_304del | p.His101Glnfs*36 | Likely pathogenic (PVS1 + PM2) | Father carrier (asymptomatic); mother and sister negative | Partial (carrier asymptomatic) | Likely pathogenic |
| 7 | KNG1 | c.1690 C > T | p.Gln564Ter | Likely pathogenic (PVS1 + PM2) | No family data | Not available | Likely pathogenic |
| 8 | KNG1 | c.1143G > C | p.Arg381Ser | VUS (PM2) | No family data | Not available | Variant of uncertain significance |
ACMG classification was determined based on 2015 ACMG/AMP criteria. “VUS” denotes “variant of uncertain significance.” “Partial” co-segregation indicates that the variant was found in a relative without symptoms (suggesting incomplete penetrance)
Clinical interpretation incorporates genotype, phenotype, family history, and treatment response
Patient numbers correspond to those listed in Table 3 for HAE-nC1-INH