Table 2. Classification of 33 SM BGCs detected in the genome of P. paneum OM1 and the predicted SM products.
| Type | Number of SM gene cluster | Contig number |
Length
(bp) |
Most similar known cluster |
|---|---|---|---|---|
| NRPS | 1 | 10 | 45,286 | metachelin C/metachelin A/metachelin A-CE/metachelin B/dimerumic acid 11-mannoside/dimerumic acid |
| 2 | 8 | 49,474 | – | |
| 58,554 | nidulaninA | |||
| NRPS-like | 4 | 6 | 42,624 | – |
| 43,830 | choline | |||
| 42,181 | – | |||
| 44,283 | – | |||
| 1 | 9 | 44,331 | – | |
| NRPS-indole | 1 | 8 | 52,499 | paraherquamide |
| 1 | 9 | 46,277 | histidyltryptophanyldiketopiperazine/ dehydrohistidyltryptophanyldiketopiperazine/roquefortine D/ roquefortine C/glandicoline A/glandicoline B/meleagrin | |
| NRP-metallophore (NRPS) | 1 | 10 | 58,820 | – |
| NRPS-T1PKS | 1 | 9 | 52,398 | chaetoglobosin A/chaetoglobosin C |
| T1PKS | 3 | 10 | 47,971 | andrastin A |
| 49,366 | – | |||
| 48,164 | – | |||
| 5 | 8 | 47,878 | – | |
| 48,387 | – | |||
| 46,893 | – | |||
| 47,300 | – | |||
| 49,474 | – | |||
| 3 | 9 | 46,052 | YWA1 | |
| 47,407 | trichoxide | |||
| 45,491 | patulin | |||
| T1PKS-NRPS | 1 | 10 | 53,409 | ACE1 |
| 2 | 8 | 52,402 | – | |
| 59,474 | metachelin C/metachelin A/metachelin A-CE/metachelin B/dimerumic acid 11-mannoside/dimerumic acid | |||
| Terpene | 1 | 6 | 21,484 | squalestatin S1 |
| 1 | 8 | 22,538 | – | |
| 1 | 9 | 21,569 | – | |
| Fungal-RiPP precursor synthase-like | 1 | 8 | 60,975 | – |
| Betalactone synthase | 1 | 6 | 23,512 | – |
| 1 | 8 | 30,837 | – | |
| Isocyanide synthase | 1 | 9 | 42,389 | – |
| Total | 33 | – | – | – |
Notes.
- NRPS
- Non-ribosomal peptide synthetase
- T1PKS
- type 1 Polyketide synthase
- RiPP
- Ribosomally synthesized and post-translationally modified peptide