TABLE 1.
Primers and fluorescent probes used in this work
| Primer or probe | Sequencea | Gene location (accession no.) |
|---|---|---|
| tubCf | 5′-CGGAAACTGGCCGTCAATAT-3′ | 1252-1271 (M17520.1) |
| tubCr | 5′-GGGCAAACCCGACCATAAA-3′ | 1297-1315 (M17520.1) |
| ptubC | 5′-6FAM-TCCCTTCCCGCGGTTGCATTT-TAMRA-3′ | 1275-1295 (M17520.1) |
| Actinf | 5′-TTCCGTGCTTGTCCCTGAAC-3′ | 462-481 (M22869.1) |
| Actinr | 5′-AAGGACGGGTAGGTCGTTGC-3′ | 505-524 (M22869.1) |
| Pactin | 5′-VIC-CTCGCCTGGTCTCGCCGCTGT-TAMRA-3′ | 483-502 (M22869.1) |
| AtrAf | 5′-TCCCTCGCATGACAATCC-3′ | 1542-1560 (Z68904.1) |
| AtrAr | 5′-GAGAGAGAATGAGGCGGAGTTG-3′ | 1596-1618 (Z68904.1) |
| pAtrA | 5′-TET-ACGATGACCTAGAAGACGCAACCCTTGAC-TAMRA-3′ | 1565-1594 (Z68904.1) |
| AtrBf | 5′-CGCTTTGCTATCTAACGAGTTTCAC-3′ | 2736-2761 (Z68905.1) |
| AtrBr | 5′-CGGCGGGCACAAGGT-3′ | 2789-2804 (Z68905.1) |
| patrB | 5′-VIC-AAGATCATTCCCTGCGTGGGCACC-3′ | 2764-2788 (Z68905.1) |
| AtrCf | 5′-TGGCATCCCGCTACATGAT-3′ | 3954-3973 (AF082072.1) |
| AtrCr | 5′-GGGTTGGGTTCTGGGTGAC-3′ | 4009-4028 (AF082072.1) |
| pAtrC | 5′-VIC-CCGTGCCCGGATCGGCCT-TAMRA-3′ | 3990-4008 (AF082072.1) |
| AtrDf | 5′-CATCCGATCTCGACGGAAAA-3′ | 3550-3569 (AF071411.1) |
| AtrDr | 5′-GCGCTGGAAACAGACTTGTG-3′ | 3616-3597 (AF071411.1) |
| pabcD | 5′-TET-CAACCATTGACCGCACGGGCA-TAMRA-3′ | 3574-3594 (AF071411.1) |
Abbreviations: 6FAM, 6-carboxyfluorescein; TAMRA, 6-carboxy-N,N,N′,N′-tetramethylrhodamine; VIC, trademark product from Applied Biosystems; TET, 6-carboxy-4,7,2′,7′-tetrachlorofluorescein.