| Antibodies |
|
| Mouse monoclonal anti-Bin1 1:100 (IF), 1:1000 (WB), 1:80 (IHC) |
Millipore |
Cat#05-449; RRID:AB_309738
|
| Rabbit monoclonal anti-Bin1 1:100 (IF) |
Abcam |
Cat#ab182562; RRID:AB_3669062
|
| Rabbit polyclonal anti-synapsin I 1:250 (IF), 1:1000 (WB) |
Abcam |
Cat#ab8; RRID:AB_2200097
|
| Rabbit polyclonal anti-PSD-95 1:200 (IF), 1:1000 (WB) |
Millipore |
Cat#AB9708; RRID:AB_2092543
|
| Guinea Pig polyclonal anti-vGLUT1 1:200 (IF), 1:500 (IHC) |
SynapticSystems |
Cat#135 304; RRID:AB_887878
|
| Rabbit polyclonal anti-vGAT 1:500 (IF), 1:200 (IHC)] |
Merck Millipore |
Cat#AB5062P; RRID:AB_2301998
|
| Mouse monoclonal anti-gephyrin 1:250 (IF) |
SynapticSystems |
Cat#147 011; RRID:AB_2810215
|
| Mouse monoclonal anti-tubulin 1:10,000 (WB) |
Millipore |
Cat#MAB1637; RRID:AB_2210524
|
| Goat monoclonal anti-GAPDH 1:10000 (WB) |
Sicgen |
Cat#ab0049; RRID:AB_2333142
|
| Mouse monoclonal anti-c-Myc 1:500 (IF) |
Thermo Fisher Scientific |
Cat#13-2500; RRID:AB_2533008
|
| Goat polyclonal anti-Rab5 1:200 (IF) |
Sicgen |
Cat#ab1024; RRID: AB_2333166
|
| Rabbit polyclonal anti-SV2A 1:200 (IF) |
SynapticSystems |
Cat#119 002; RRID:AB_887802
|
|
| Chemicals, peptides, and recombinant proteins |
|
| Heat-Inactivated FBS |
Thermo Fisher Scientific |
Cat#16140-071 |
| poly-D-lysine |
Sigma-Aldrich |
Cat#P1149 |
| Brainphys Neuronal Medium-SM1 |
STEMCELL Technologies |
Cat#05792 |
| Neurobasal medium |
Thermo Fisher Scientific |
Cat#21103049 |
| B-27 |
Thermo Fisher Scientific |
Cat#17504044 |
| Glutamax |
Thermo Fisher Scientific |
Cat#35050-038 |
| penicillin-streptomycin |
Thermo Fisher Scientific |
Cat#15140-122 |
| Lipofectamine2000 |
Thermo Fisher Scientific |
Cat#11668019 |
| Fetal Bovine Serum |
Sigma- Aldrich |
Cat#F0804 |
| DAPT |
Calbiochem |
Cat#565770 |
| β-Secretase Inhibitor IV |
Calbiochem |
Cat#565788 |
| DMSO |
PanReac AppliChem |
Cat#A3672.0100 |
| Levetiracetam |
Sigma-Aldrich |
Cat#L8668 |
| Lenti-X concentrator |
Takara |
Cat#631231 |
| Fura-Red |
Thermo Fisher Scientific |
Cat#F3021 |
| 6-cyano-7-nitroquinoxaline-2,3-dione |
Sigma-Aldrich |
Cat#C127 |
| D, L-2-amino-5-phosphonovaleric acid |
Sigma-Aldrich |
Cat#A5282 |
| FM4-64FX |
Thermo Fisher Scientific |
Cat#F34653
|
| Fluoromount-G |
Southern Biotechnology |
Cat#00-4958-02 |
| DAPI |
Sigma |
Cat#D9542 |
|
| Experimental models: Cell lines |
|
| N2a |
Z. Lenkei (IPNP) |
ATCC®CCL-131™ |
|
| Experimental models: Organisms/strains |
|
| Mouse/ BALB/c |
Charles River |
BALB/cByJ |
|
| Recombinant DNA |
|
| vGAT-pHluorin |
SH Kim (Kyung Hee University) |
N/A |
| vGLUT1-pHluorin |
SH Kim |
N/A |
| pCI syn iGluu |
Addgene |
Cat#106122 |
| pGP-CAG-iGABASnFR2-WPRE-bGH-polyA |
Addgene |
Cat#218868 |
| nBin1-myc |
In house |
27 |
| nBin1PL-myc |
In house |
|
| nBin1KR-myc |
In house |
|
| shBin10
|
Sigma |
TRCN0000380696 |
| shBin11
|
Sigma |
TRCN0000380439 |
| shBin12
|
Sigma |
TRCN0000088191 |
| TurboGFP™ Positive Control Plasmid DNA |
Sigma |
Cat#SHC003 |
| pGFP-C-shLenti |
OriGene Technologies |
Cat#NC1766994 |
| psPAX2 |
D Trono(EPFL) |
Cat#12260 |
| pMD2.G |
D Trono(EPFL) |
Cat#12259 |
|
| Software and algorithms |
|
| Fiji (version 1.53) |
NIH |
https://fiji.sc/85
|
| Time Series Analyzer-V3 |
Balaji-J |
https://imagej.net/ij/plugins/time-series.html |
| ICY |
Institut Pasteur and France-BioImaging |
Icy.bioimageanalysis.org86
|
| IMARIS (version 9.5.0) |
Oxford Instruments |
https://imaris.oxinst.com/ |
| ComDet v.0.5.5 |
Katrukha |
https://github.com/ekatrukha/ComDet |
| GraphPad (version 8.4.0) |
Dotmatics |
www.graphpad.com |
| CellProfiler (version 4.2.1) |
Cimini lab (Broad Institute) |
www.cellprofiler.org87
|