3C	Chromosome Conformation Capture
AR	Antibiotic Resistance
ARB	Antibiotic-Resistant Bacteria
ARG	Antibiotic Resistance Gene
CARD	Comprehensive Antibiotic Resistance Database
DO	Dissolved Oxygen
ENA	European Nucleotide Archive
EpicPCR	Emulsion, Paired Isolation and Concatenation Polymerase Chain Reaction
FACS	Fluorescence-Activated Cell Sorting
FAIR	Findable, Accessible, Interoperable, and Reusable
FIB	Faecal Indicator Bacteria
FST	Faecal Source Tracking
HGT	Horizontal Gene Transfer
MAG	Metagenomic Assembled Genomes
MGE	Mobile Genetic Element
MRG	Metal Resistance Gene
MST	Microbial Source Tracking
NGS	Next-Generation Sequencing
PICT	Pollution-Induced Community Tolerance
qPCR	Real-time Quantitative PCR
ROS	Reactive Oxygen Species
SRA	Sequence Read Archive
WWTP	Wastewater Treatment Plant