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. 2025 Jul 22;14(8):910. doi: 10.3390/biology14080910
LC-MS Liquid chromatography–tandem mass spectrometry
TNBC Triple-negative breast cancer
ER Estrogen receptor
PR Progesterone receptor
HER2 Human epidermal growth factor receptor 2
CDKs Cyclin-dependent kinases
PCD Programmed cell death
FBS Fetal bovine serum
ESI Electrospray ionization
TIC Total ion chromatograms
HRMS Human epidermal growth factor receptor 2
IC50 Half-maximal inhibitory concentration
PI Propidium iodide
LFQ Label-Free Quantification
DR-AE Dandelion root aqueous extract
DR-EE Dandelion root ethanol extract
DL-AE Dandelion leaf aqueous extract
DL-EE Dandelion leaf ethanol extract
EA Ethyl acetate
EA-2 The second subfraction of the ethyl acetate extract
FDR False discovery rate
DEPs Differentially expressed proteins
GO Gene Ontology
KEGG Kyoto Encyclopedia of Genes and Genomes
LogP Partition coefficients
EMT Epithelial–mesenchymal transition
ROS Reactive oxygen species
UPLC Ultra-performance liquid chromatography
SIM Selected ion monitoring
SDT Lysis buffer composed of SDS, DTT, and Tris-HCl
SDS Sodium dodecyl sulfate
DTT Dithiothreitol
BCA Bicinchoninic Acid Assay
FASP Filter-aided sample preparation
IAA Iodoacetamide
DDA Data-dependent acquisition
HCD Higher-energy collisional dissociation
FC Fold change
KAAS KEGG Automatic Annotation Server