| AI | Artificial Intelligence |
| ARGs | Antibiotic Resistance Genes |
| ASV | Amplicon Sequence Variant |
| COI | Cytochrome Oxidase I |
| CRISPR-Cas | Clustered Regularly Interspaced Short Palindromic Repeats–CRISPR-associated proteins |
| dPCR | Digital Polymerase Chain Reaction |
| ddPCR | Droplet Digital Polymerase Chain Reaction |
| eDNA | Environmental DNA |
| GIS | Geographic Information Systems |
| ITS | Internal Transcribed Spacer |
| HEPA | High-Efficiency Particulate Air (filter) |
| HTS | High-Throughput Sequencing |
| ISO | International Organization for Standardization |
| LAMP | Loop-Mediated Isothermal Amplification |
| RPA | Recombinase Polymerase Amplification |
| LSTM | Long Short-Term Memory |
| MIQE | Minimum Information for Publication of Quantitative Real-Time PCR Experiments |
| NGS | Next Generation Sequencing |
| OTU | Operational Taxonomic Unit |
| PCBs | Polychlorinated Biphenyls |
| PCR | Polymerase Chain Reaction |
| PM | Particulate Matter |
| PTFE | Polytetrafluoroethylene |
| qPCR | Quantitative Polymerase Chain Reaction |
| US EPA | United States Environmental Protection Agency |