PDR	Pandrug-resistant
MDR	Multidrug-resistant
AMR	Antimicrobial resistance
AST	Antimicrobial susceptibility testing
CARD	Comprehensive Antibiotic Resistance Database
Cas	CRISPR-associated proteins
CC	Clonal complex
cgMLST	Core genome multilocus sequence typing
CLSI	Clinical and Laboratory Standards Institute
CRISPR	Clustered regularly interspaced short palindromic repeats
ESBL	Extended-spectrum β-lactamase
In0	Integron type 0
Inc	Incompatibility group
ICU	Intensive care unit
KpSC	Klebsiella pneumoniae species complex
KL	Capsular locus
MGEs	Mobile genetic elements
MLST	Multilocus sequence typing
NCBI	National Center for Biotechnology Information
NGS	Next-generation sequencing
ORF	Open reading frame
PHOENIX	Automated microbial identification system
scgST	Subclonal genotype
SPAdes	St. Petersburg genome assembler
ST	Sequence type
TLA	Three letter acronyms
UTI	Urinary tract infection
WGS	Whole-genome sequencing
wzi	Capsule-associated gene in K. pneumoniae