| PERMANOVA | Permutational Multivariate Analysis of Variance |
| HEI-2020 | Healthy Eating Index-2020 |
| 16S rRNA | 16S ribosomal Ribonucleic Acid |
| db-RDA | Distance-based Redundancy Analysis |
| PCoA | Principal Coordinates Analysis |
| R2 | Coefficient of Determination |
| SES | Socioeconomic Status |
| FFQ | Food Frequency Questionnaire |
| FINUT | Ibero-American Nutrition Foundation |
| BEDCA | Spanish Food Composition Database |
| USDA | United States Department of Agriculture |
| IPAQ | International Physical Activity Questionnaire |
| MET | Metabolic Equivalent of Task |
| E.Z.N.A. | E.Z.N.A. stands for ‘Easy Nucleic Acid’, a brand of nucleic acid extraction kits |
| DNA | Deoxyribonucleic Acid |
| Bio-Tek, Inc | Bio-Tek Instruments, Inc. (a laboratory instrumentation company) |
| FastQC | Fast Quality Control (a tool for quality checking high throughput sequence data) |
| DADA2 | Divisive Amplicon Denoising Algorithm 2 |
| QIIME2 | Quantitative Insights Into Microbial Ecology 2 |
| ASVs | Amplicon Sequence Variants |
| VSEARCH | Vectorized Search (open-source tool for metagenomics) |
| SILVA | SILVA ribosomal RNA gene database project |
| MAFFT | Multiple Alignment using Fast Fourier Transform |
| PCR | Polymerase Chain Reaction |
| IDT | Integrated DNA Technologies |
| Qiagen | Qiagen (biotech company for DNA/RNA extraction and analysis kits) |
| RT-PCR | Reverse Transcription Polymerase Chain Reaction |
| RNase | Ribonuclease |
| DNase | Deoxyribonuclease |
| CEI-FAMEN | Comité de Ética en Investigación de la Facultad de Medicina y Nutrición (ESP) |
| envfit | Environmental Fitting Function (in R vegan package 2.6-10) |
| CAP1 | Canonical Axis 1 (used in constrained ordination analyses) |
| MDS1 | Multidimensional Scaling Dimension 1 |
| F | F-statistic |
| p | p-value |
| Df | Degrees of Freedom |
| SCFAs | Short-Chain Fatty Acids |
| ST1 | Subtype 1 (Blastocystis subtype) |
| ST4 | Subtype 4 (Blastocystis subtype) |
| ST7 | Subtype 7 (Blastocystis subtype) |