Table 2.
Summary of percentage sequence identities of nucleotide (nt) and amino acid (aa) for NS1, VP7, and VP6 for Asia, Australia, Africa, CI groups, and all strains, respectively.
| Varied geographical origins of PALV | Asia group | Australia group | Africa group | CI group | All strains | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| nt | aa | nt | aa | nt | aa | nt | aa | nt | aa | |
| Seg-5/NS1 | ≥94.3 | ≥96.8 | ≥94.9 | ≥97.7 | ≥97.4 | ≥98.1 | 83.5 | 93.5 | ≥80.9 | ≥91.9 |
| μ = 97.5 | μ = 98.6 | μ = 96.1 | μ = 98.5 | μ = 98.5 | μ = 99.5 | - | - | μ = 89.5 | μ = 96.5 | |
|
| ||||||||||
| Seg-7/VP7 | ≥90.3 | ≥97.7 | ≥89.7 | ≥99.7 | ≥96.9 | ≥99.1 | 89.5 | 99.4 | ≥84.3 | ≥97.7 |
| μ = 95.7 | μ = 99.5 | μ = 94.6 | μ = 99.9 | μ = 98.4 | μ = 99.8 | - | - | μ = 89.6 | μ = 99.3 | |
|
| ||||||||||
| Seg-9/VP6 | ≥93.0 | ≥91.9 | ≥97.9 | ≥97.4 | ≥95.3 | ≥93.7 | 93.2 | 92.2 | ≥86.4 | ≥84.5 |
| μ = 96.5 | μ = 96.4 | μ = 98.3 | μ = 98.0 | μ = 97.0 | μ = 96.3 | - | - | μ = 91.7 | μ = 91.0 | |
Note: μ is the mean, “-” is not available.