Table 1:
Pairwise PERMANOVA on Bray-Curtis and unweighted UniFrac distance of aquaculture facility water microbiome. p-value adjusted with Benhamini-Hochberg correction.
| Bray-Curtis | |||||||
|---|---|---|---|---|---|---|---|
| pairs | Df | SumsOfSqs | F.Model | R2 | p.value | p.adjusted | sig |
| Ore1 vs Ore2 | 1 | 1.8801363 | 9.061010 | 0.2206719 | 0.001 | 0.01 | * |
| Ore1 vs Nor2A | 1 | 2.5048624 | 10.524188 | 0.2881430 | 0.001 | 0.01 | * |
| Ore1 vs Nor2B | 1 | 1.6105481 | 6.939968 | 0.2317961 | 0.005 | 0.05 | . |
| Ore1 vs Nor1 | 1 | 2.4533282 | 10.775905 | 0.2852587 | 0.001 | 0.01 | * |
| Ore2 vs Nor2A | 2 | 2.5150135 | 6.751745 | 0.4737486 | 0.001 | 0.01 | * |
| Ore2 vs Nor2B | 1 | 1.6893445 | 11.302569 | 0.4650771 | 0.002 | 0.02 | . |
| Ore2 vs Nor1 | 1 | 2.3208669 | 14.334089 | 0.4574599 | 0.001 | 0.01 | * |
| Nor2Avs Nor2B | 1 | 0.9079807 | 4.261691 | 0.3784237 | 0.011 | 0.11 | |
| Nor2Avs Nor1 | 1 | 1.5323010 | 7.325676 | 0.3997493 | 0.001 | 0.01 | * |
| Nor2B vs Nor1 | 1 | 1.3919969 | 7.679089 | 0.4897663 | 0.010 | 0.10 | |
| Unweighted UniFrac | |||||||
| pairs | Df | SumsOfSqs | F.Model | R2 | p.value | p.adjusted | sig |
| Ore1 vs Ore2 | 1 | 1.1775325 | 5.886370 | 0.1553691 | 0.001 | 0.01 | * |
| Ore1 vs Nor2A | 1 | 1.6593681 | 9.030955 | 0.2577993 | 0.001 | 0.01 | * |
| Ore1 vs Nor2B | 1 | 0.8515854 | 4.331148 | 0.1584693 | 0.005 | 0.05 | . |
| Ore1 vs Nor1 | 1 | 1.1684623 | 6.093103 | 0.1841200 | 0.001 | 0.01 | * |
| Ore2 vs Nor2A | 2 | 1.4231007 | 3.633566 | 0.3263614 | 0.001 | 0.01 | * |
| Ore2 vs Nor2B | 1 | 0.7616227 | 3.691215 | 0.2211472 | 0.002 | 0.02 | . |
| Ore2 vs Nor1 | 1 | 0.9970251 | 5.077958 | 0.2300012 | 0.001 | 0.01 | * |
| Nor2A vs Nor2B | 1 | 0.8264406 | 5.466732 | 0.4385056 | 0.011 | 0.11 | |
| Nor2A vs Nor1 | 1 | 0.8317548 | 5.338801 | 0.3267560 | 0.001 | 0.01 | * |
| Nor2B vs Nor1 | 1 | 0.7611186 | 4.174308 | 0.3428785 | 0.010 | 0.10 | |