Table 1.
Candidate CDKL5 binding partners with consensus motif.
SL | UniProt | Gene | pSite | Consensus Motif (RPX[S/T][A/G/P/S]) |
Protein | Evidence | Source |
---|---|---|---|---|---|---|---|
1 | Q92974 | ARHGEF2 | S122 | TIRERPSsAIYPS | Rho guanine nucleotide exchange factor 2 | Motif and biochemical | [32] |
2 | P49418 | AMPH1 | S293 | PAPARPRsPSQTR | Amphiphysin1 | Motif and biochemical | [32] |
3 | Q9UPN4 | CEP131 | S35 | PVSRRPGsAATTK | Centrosomal protein of 131 kDa | Motif and biochemical | [32] |
4 | Q8TDM6 | DLG5 | S1115 | QKRRRPKsAPSFR | Disks large homolog 5 | Motif and biochemical | [32] |
5 | Q14241 | ELOA | S311 | EENRRPPsGDNAR | Elongin A | Motif and biochemical | [32] |
6 | Q96L91 | EP400 | S729 | SPVNRPSsATNKA | EE1A-binding protein p400 | Motif and biochemical | [32] |
7 | Q66K74 | MAP1S | S871, S900 | KAPARPSsASATP, DRASRPLsARSEP | Microtubule-associated protein 1S | Motif and biochemical | [32] |
8 | Q15555 | EB2/MAPRE2 | S222 | STPSRPSsAKRAS | Microtubule-associated protein RP/EB family member 2 | Motif and biochemical | [32] |
9 | Q8TAP9 | TTDN1 | S40 | GGGPRPPsPRDGY | TTD non-photosensitive 1 protein | Motif and biochemical | [32] |
10 | P26358 | DNMT1 | N/A | DNA methyltransferase 1 | Biochemical | [32] | |
11 | P56524 | HDAC4 | S632 | RPLSRAQsSPASAtF | Histone deacetylase 4 | Motif and biochemical | [32] |
12 | Q9HCJ2 | NGL-1/KIAA1580/LRRC4C | S631 | PLLIRMNsKDNVQET | Netrin-G ligand-1 | Motif and biochemical | [32] |
13 | P84022 | SMAD3 | N/A | N/A | Mothers against decapentaplegic homolog 3 | Biochemical | [32] |
14 | P48436 | SOX9 | S199 | ATEQTHIsPNAIFKA | Transcription factor SOX-9 | Biochemical | [32] |
15 | P46940 | IQGAP1 | N/A | N/A | IQ Motif Containing GTPase Activating Protein 1 | Biochemical | [32] |
16 | P51608 | MeCP2 | N/A | N/A | Methyl-CpG binding protein 2 | Biochemical | [32] |
17 | P78352 | PSD95/DLG4 | N/A | N/A | Postsynaptic density protein 95 | Biochemical | [32] |
18 | A0MZ66 | SHTN1/SHOT1 | N/A | N/A | Shootin1 | Biochemical | [32] |
19 | P78347 | GTF2I | S674 | QSPKRPRsPGSNS | General transcription factor II-I | Motif and biochemical | [42] |
20 | Q8TAP8 | PPP1R35 | S52 | SLSPRPDsPQPRH | Protein phosphatase 1 regulatory subunit 35 | Motif and biochemical | [42] |
21 | Q86YP4 | GATAD2A | S100 | KSERRPPsPDVIV | GATA zinc finger domain containing 2A | Motif and biochemical | [42] |
22 | Q9P2Y4 | ZNF219 | S114 | HQPERPRsPAARL | Zinc finger protein 219 | Motif and biochemical | [42] |
23 | Q15878 | CACNA1E/Cav2.3 | S14 | AVVARPGsGDGD | Voltage-dependent R-type calcium channel subunit alpha-1E (Cav2.3) | Motif and biochemical | [62] |
24 | Q13501 | SQSTM1/p62 | T269/S272 | RSRLTPVsPESS, GGKRSRLtPVSP | Sequestosome-1(p62) | Biochemical | [63] |