Skip to main content
. 2025 Sep 3;16:1663650. doi: 10.3389/fpls.2025.1663650

Table 2.

List of seven genes located within 50 kb upstream or downstream and dosest to the four SNP markers identified in Table 1 , which are associated with the disease severity index (DSI) for Stemphylium leaf spot resistance in 311 spinach accessions.

Gene Chr Start_pos End_pos Gene name SNP Chr Pos Distance from gene_start from gene_end Comment
SOV1g040270 1 127752039 127753611 CASP-like protein SOVchr1_127757911 1 127757911 5872 4300 <5kb
SOV1g040280 1 127753403 127755510 photosynthetic NDH subunit of lumenal location 2, chloroplastic 4508 2401 <2.5kb
SOV2g005490 2 21945470 21946359 Unknown protein SOVchr2_21962694 2 21962694 17224 16335 <17kb
SOV2g005500 2 22027716 22032032 CRS2-associated factor 1, chloroplastic -65022 -69338 <66kb
SOV4g030080 4 114632566 114633635 Gamma-interferon-inducible lysosomal thiol reductase SOVchr4_114674293 4 114674293 41727 40658 <41kb
SOV4g030090 4 114718128 114723113 Basic-leucine zipper domain -43835 -48820 <44kb
no gene in the region of 100 Kb SOVchr5_37417509 5 37417509
SOV5g021190 5 37515001 37517838 Fe2OG dioxygenase domain-containing protein -97492 -100329 <100kb