Table 3.
Percentage abundances of the most abundant genera across every analysed colon related bioproject
| Family | Genus | Average across samples | Average including off-targets |
|---|---|---|---|
| Bacteroidaceae | Bacteroides | 19.40 | 17.88 |
| Ruminococcaceae | Faecalibacterium | 6.45 | 6.21 |
| Enterobacteriaceae | Escherichia-Shigella | 5.48 | 4.99 |
| Fusobacteriaceae | Fusobacterium | 4.73 | 4.24 |
| Prevotellaceae | Prevotella | 3.56 | 3.15 |
| Lachnospiraceae | Blautia | 2.9 | 2.77 |
| Streptococcaceae | Lactococcus | 2.67 | 2.63 |
| Xanthomonadaceae | Stenotrophomonas | 1.93 | 1.91 |
| Pseudomonadaceae | Pseudomonas | 1.84 | 1.7 |
| Lachnospiraceae | Anaerostipes | 1.83 | 1.79 |
| Moraxellaceae | Acinetobacter | 1.76 | 1.59 |
| Streptococcaceae | Streptococcus | 1.63 | 1.51 |
| Tannerellaceae | Parabacteroides | 1.57 | 1.48 |
| Lachnospiraceae | Ruminococcus torques group | 1.53 | 1.41 |
| Rikenellaceae | Alistipes | 1.42 | 1.38 |
| Akkermansiaceae | Akkermansia | 1.33 | 1.3 |
| Lachnospiraceae | NA | 1.3 | 1.25 |
| Sutterellaceae | Sutterella | 1.25 | 1.16 |
| Lachnospiraceae | Lachnoclostridium | 1.2 | 1.14 |
| Enterococcaceae | Enterococcus | 1.19 | 1.08 |
| Ruminococcaceae | Subdoligranulum | 1.07 | 1.04 |
| Lachnospiraceae | Ruminococcus gnavus group | 1.03 | 0.98 |
| Lachnospiraceae | Roseburia | 1 | 0.96 |
| Lachnospiraceae | Agathobacter | 0.92 | 0.87 |
Note: The column “Average across samples” reports the average computed in the off-target decontaminated dataset, while the column “Average including off-targets” shows the averages in the dataset including the off-targets ASVs.