Table 4. Earth Biogenome Project summary metrics for the Issoria lathonia assembly.
Measure | Value | Benchmark |
---|---|---|
EBP summary (haplotype 1) | 6.7.Q55 | 6.C.Q40 |
Contig N50 length | 5.66 Mb | ≥ 1 Mb |
Scaffold N50 length | 11.25 Mb | = chromosome N50 |
Consensus quality (QV) | Haplotype 1: 55.7; haplotype 2: 55.8;
combined: 55.7 |
≥ 40 |
k-mer completeness | Haplotype 1: 71.32%; Haplotype 2: 66.68%;
combined: 99.84% |
≥ 95% |
BUSCO | C:98.8%[S:98.5%‚D:0.4%]‚ F:0.2%‚M:1.0%‚n:5
286 |
S > 90%; D < 5% |
Percentage of assembly assigned to chromosomes | 99.92% | ≥ 90% |