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. 2025 Sep 15;14(9):1271. doi: 10.3390/biology14091271
AAI Average Amino Acid Identity
ANI Average Nucleotide Identity
ANIm ANI using MUMmer alignment
BGC(s) Biosynthetic Gene Cluster(s)
CDs/CDSs Coding Sequences
dDDH Digital DNA–DNA Hybridization
DMSO Dimethyl Sulfoxide
GI(s) Genomic Island(s)
GTDB Genome Taxonomy Database
GTDB-Tk GTDB Toolkit
MGE(s) Mobile Genetic Element(s)
NSW Natural Seawater
Prokka Rapid Prokaryotic Genome Annotation
TYGS Type Strain Genome Server
WGS Whole-Genome Sequencing