| 2-DE | Two-dimensional Gel Electrophoresis |
| AI | Artificial Intelligence |
| AK | Arginine kinase |
| AQUA | Absolute quantification |
| DDA | Data-dependent acquisition |
| DIA | Data-independent acquisition |
| ELISA | Enzyme-Linked Immunosorbent Assay (ELISA) |
| ESI | Electrospray Ionization |
| HIFU | High-intensity focused ultrasound |
| HSP | Heat-shock protein |
| IMS | Immunomagnetic separation |
| IT | Ion Trap |
| iTRAQ | Isobaric Tags for Relative and Absolute Quantification |
| LC-MS | Liquid Chromatography coupled to Mass Spectrometry |
| LFQ | Label-free quantitation |
| LIT | Linear Ion Trap |
| LOD | Limit of detection |
| LOQ | Limit of Quantitation |
| MALDI-TOF | Matrix-Assisted Laser Desorption/Ionization–Time of Flight |
| MRM | Multiple Reaction Monitoring |
| PAL | Precautionary Allergen Labeling |
| PASEF | Parallel Accumulation–Serial Fragmentation |
| PCR | Polymerase Chain Reaction |
| PRM | Parallel Reaction Monitoring |
| PTM | Post-translational modification |
| QqQ | Triple–quadrupole |
| SCP | Sarcoplasmic calcium-binding protein |
| SIL | Stable Isotope–Labeled peptide |
| SRM | Single Reaction Monitoring |
| timsTOF | Trapped-Ion Mobility Spectrometry–TOF |
| TM | Tropomyosin |
| TMT | Tandem Mass Tag |
| UVPD | Ultraviolet photodissociation |
| VITAL | Voluntary Incidental Trace Allergen Labelling |
| β-PVALB | Beta-parvalbumin |