TABLE 1.
Sample | Presence of microsporidia as determined by:
|
BLAST A resultsa
|
Probability of errorb | ||
---|---|---|---|---|---|
IFA | PCR | Species | Nucleotide sequence accession no. | ||
Unknown 42 | + | + | Septata intestinalis | U39297 | 1.2 × 10−71 |
Unknown 60 | + | + | Septata intestinalis | U39297 | 3.8 × 10−72 |
Unknown 64 | + | + | Septata intestinalis | U39297 | 1.8 × 10−71 |
Unknown 70 | + | + | Septata intestinalis | U39297 | 3.9 × 10−75 |
Unknown 208 | + | + | Septata intestinalis | U39297 | 1.8 × 10−73 |
Enterocytozoon bieneusi positive control | NDc | + | Enterocytozoon bieneusi | L07123 | 1.3 × 10−73 |
Encephalitozoon intestinalis positive control | + | + | Septata intestinalis | U39297 | 3.4 × 10−73 |
Encephalitozoon cuniculi positive control | + | + | Encephalitozoon cuniculi | L39107 | 1.3 × 10−69 |
Encephalitozoon hellem positive control | + | + | Encephalitozoon hellem | L19070 | 1.6 × 10−77 |
The organism whose sequence was identified by the BLAST A method as having the highest homology and the nucleotide sequence accession number of this sequence.
The probability (on a scale of 0 to 1) that the sequence identified occurred by chance.
ND, not determined.