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. 2025 Sep 30;12:RP90607. doi: 10.7554/eLife.90607

Table 1. RdnE and RdnI homolog species.

Genus species strain Phylum Isolation Location RdnE JGI unique ID RdnI JGI unique ID
Acinetobacter baumannii BJAB0715 Proteobacteria Fresh water 2562302616 2562302617
Acinetobacter baumannii XH858 Proteobacteria Human sputum 2686809281 2686809282
Burkholderia sp. TSV86 Proteobacteria Water 2766166119 2766166118
Cellulophaga baltica 18 Bacteroidota Water 2815949879 2815949878
Chryseobacterium indologenes NBRC 14944 Bacteroidota Human trachea 2565567985 2565567984
Chryseobacterium populi CF314 Bacteroidota Soil rhizosphere 2511231970 2511231971
Chryseobacterium sp. IHB B 17019 Bacteroidota Soil undefined subtype 2686963654 2686963655
Cronobacter turicensis 564 Proteobacteria Human undefined subtype 2532469359 2532469360
Cronobacter turicensis z3032 Proteobacteria Human blood culture 646327905 646327906
Endozoicomonas numazuensis DSM 25634 Proteobacteria Marine sponge 2574519540 2574519541
Paenibacillus elgii M63 Firmicutes Hot spring 2744846532 2744846531
Paenibacillus sp. Aloe-11 Firmicutes Soil rhizosphere 2549870597 2549870598
Prevotella jejuni CD3:33 Bacteroidota Human intestine biopsy 2804797915 2804797916
Prevotella sp. C561 Bacteroidota Human respiratory tract 2514485316 2514485315
Prevotella sp. F0108 Bacteroidota Human oral cavity 647936965 647936966
Proteus mirabilis BB2000 Proteobacteria Human intestine biopsy 2546214711 2546214712
Pseudomonas ogarae F113 Proteobacteria Soil rhizosphere 2511826458 2511826457
Pseudomonas syringae pv. Coriandricola ICMP 12471 Proteobacteria Undefined 2714543877 2714543878
Rothia dentocariosa C6B Actinobacteriota Human oral cavity 2611822673 2611822674
Tannerella forsythia ATCC 43037 Bacteroidota Human oral cavity 2512371376 2512371377
Taylorella asinigenitalis MCE3 Proteobacteria Mammal reproductive system 2511725471 2511725470